RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HNRNPDQ14103 355 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 FAM187BQ17R55 369 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CWF19L2Q2TBE0 894 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ADNP2Q6IQ32 1131 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 Q6P435 159 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 POMZP3Q6PJE2 187 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF836Q6ZNA1 936 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 RBFAQ8N0V3 343 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CLIP4Q8N3C7 705 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 POM121L12Q8N7R1 296 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMEM99Q8N816 258 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 MAB21L3Q8N8X9 362 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 Q8N9L7 120 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 TEX45Q8NA69 505 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 RNF128Q8TEB7 428 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 PNISRQ8TF01 805 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ASB15Q8WXK1 588 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CDC5LQ99459 802 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 RNF5Q99942 180 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 OSBPL6Q9BZF3 934 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 WNT5BQ9H1J7 359 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 OSBPL2Q9H1P3 480 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 POLR1BQ9H9Y6 1135 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 PATZ1Q9HBE1 687 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLC24A3Q9HC58 644 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 BRMS1Q9HCU9 246 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 NIT2Q9NQR4 276 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 MSRB1Q9NZV6 116 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 IL17BQ9UHF5 180 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF230Q9UIE0 474 aaPredicted RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 COG6Q9Y2V7 657 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 PCDHA8Q9Y5H6 950 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 NUMBLQ9Y6R0 609 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 DNAH7Q8WXX0 4024 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 LAMC1P11047 1609 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 MYO9AB2RTY4 2548 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 DNAH5Q8TE73 4624 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 SACSQ9NZJ4 4579 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 UMODL1Q5DID0 1318 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 IGKV1-27A0A075B6S5 117 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 A0A0U1RQJ8 604 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 WI2-2373I1.2A0A1W2PRP0 233 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 CTAGE5O15320 804 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 PJA2O43164 708 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 EXOC3O60645 756 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 RAB11FIP3O75154 756 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 RTN2O75298 545 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 IGLV1-44P01699 117 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRKCBP05771 671 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 FCGR2AP12318 317 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF823P16415 610 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 HDCP19113 662 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 MATN1P21941 496 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ITGA3P26006 1051 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 EPHA3P29320 983 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 AXLP30530 894 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 CTCFP49711 727 aaPredicted RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 LINC01547P58512 204 aaPredicted RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 SRPK2P78362 688 aaKnown RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 CFHR3Q02985 330 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 TRAF2Q12933 501 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ELOAQ14241 798 aaKnown RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 RNPS1Q15287 305 aaKnown RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 SPIN3Q5JUX0 258 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 C10orf91Q5T1B1 145 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMTC4Q5T4D3 741 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 MAP3K21Q5TCX8 1036 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 SEL1L3Q68CR1 1132 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 C19orf48Q6RUI8 117 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 MB21D2Q8IYB1 491 aaPredicted RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 RNF182Q8N6D2 247 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 PAPD5Q8NDF8 572 aaKnown RBP-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 FBXO27Q8NI29 283 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMC1Q8TDI8 760 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLC22A17Q8WUG5 538 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 THAP4Q8WY91 577 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 GBP4Q96PP9 640 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 SNX18Q96RF0 628 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 TBX15Q96SF7 602 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 PNKPQ96T60 521 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 PANK2Q9BZ23 570 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ING2Q9H160 280 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 PDFQ9HBH1 243 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ADGRL4Q9HBW9 690 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF319Q9P2F9 582 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 RAB21Q9UL25 225 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ERVK-11Q9UQG0 969 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 ASB1Q9Y576 335 aa-1.31□□□□□ -2.62
RNU4-88P-201ENST00000411220 DLG5Q8TDM6 1919 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 IGKV1D-13A0A0B4J2D9 117 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 A0A0U1RQS6 177 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 INAFM1C9JVW0 142 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 H3BMH7 237 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 NR5A2O00482 541 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 ULK1O75385 1050 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 NEURL1O76050 574 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 ATG7O95352 703 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 PF4P02776 101 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 EPHX1P07099 455 aa-1.32□□□□□ -2.62
RNU4-88P-201ENST00000411220 ASNSP08243 561 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms