RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 LAMP3Q9UQV4 416 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 A0A1B0GUV1 79 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 ISM1B1AKI9 464 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 PRPF4O43172 522 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 RGS14O43566 566 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZBTB11O95625 1053 aaPredicted RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 LCATP04180 440 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 ENO1P06733 434 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF12P17014 697 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 TFEBP19484 476 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 DUSP1P28562 367 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 CIITAP33076 1130 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 IGHMBP2P38935 993 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 SLC12A2P55011 1212 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 POLE2P56282 527 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 RPL36AP83881 106 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 Q0VFX4 171 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 GRSF1Q12849 480 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 CLCA4Q14CN2 919 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 KIAA1755Q5JYT7 1200 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 C9orf50Q5SZB4 431 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 TMEM63BQ5T3F8 832 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 RNF220Q5VTB9 566 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 KLHDC7AQ5VTJ3 777 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 LIPMQ5VYY2 423 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 RAP1GAP2Q684P5 730 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 ABLIM2Q6H8Q1 611 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 NADSYN1Q6IA69 706 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 FBXL22Q6P050 247 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 CRTC1Q6UUV9 634 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 Q6ZTK2 550 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 PIK3AP1Q6ZUJ8 805 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 NGDNQ8NEJ9 315 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 MBD3L2Q8NHZ7 208 aaPredicted RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 IP6K1Q92551 441 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 APIPQ96GX9 242 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 SUCLG2Q96I99 432 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF845Q96IR2 970 aaPredicted RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 SNX22Q96L94 193 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 WDR24Q96S15 920 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 WDR83Q9BRX9 315 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 POLDIP3Q9BY77 421 aaKnown RBP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 CDH19Q9H159 772 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 SLC25A32Q9H2D1 315 aa1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU2-55P-201ENST00000411146 AQP7P3A6NL99 342 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 PRSS47A8MTI9 375 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 M0QYT0 321 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ACOT8O14734 319 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SPTLC2O15270 562 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 IFNA2P01563 188 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 RFX2P48378 723 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ENTPD1P49961 510 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 HILS1P60008 231 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ERVFC1-1P60608 527 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SHC2P98077 582 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 EEF1A2Q05639 463 aaKnown RBP1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 TRAF3Q13114 568 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 GPS2Q13227 327 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 GRM3Q14832 879 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 DLGAP5Q15398 846 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 PTPROQ16827 1216 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ANXA2RQ3ZCQ2 193 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ACSM6Q6P461 480 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SLC39A5Q6ZMH5 540 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 MEX3BQ6ZN04 569 aaKnown RBP1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SLC16A12Q6ZSM3 486 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 C16orf82Q7Z2V1 217 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 UEVLDQ8IX04 471 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 DDIASQ8IXT1 998 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 YAF2Q8IY57 180 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 NEXN-AS1Q8NBZ9 246 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 C7orf57Q8NEG2 295 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ENGASEQ8NFI3 743 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ELP5Q8TE02 316 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 LRTOMTQ8WZ04 291 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SENP7Q9BQF6 1050 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 FAM83DQ9H4H8 585 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 CDCP1Q9H5V8 836 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF556Q9HAH1 456 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 PLAC1Q9HBJ0 212 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF287Q9HBT7 754 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SDF2L1Q9HCN8 221 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 DDX56Q9NY93 547 aaKnown RBP1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 SELENONQ9NZV5 590 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF212Q9UDV6 495 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 FBXO4Q9UKT5 387 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 OGDHLQ9ULD0 1010 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 PCDHB7Q9Y5E2 793 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 PCDHGB6Q9Y5F9 930 aa1.75□□□□□ -2.13
RNU2-55P-201ENST00000411146 EMSYQ7Z589 1322 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 CXorf65A6NEN9 183 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 SRRM3A6NNA2 597 aaPredicted RBP1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 RHODO00212 210 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 FRS3O43559 492 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 RFPL1O75677 317 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 AKR1A1P14550 325 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 CPA1P15085 419 aa1.74□□□□□ -2.13
RNU2-55P-201ENST00000411146 TCEA1P23193 301 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms