RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 PCDHGC3Q9UN70 934 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 SMAPO00193 183 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 ERVK-21P61565 698 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 GPC5P78333 572 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 TAF1BQ53T94 588 aaPredicted RBP14.8□□□□□ -0.04
MINDY4-202ENST00000409881 IRGCQ6NXR0 463 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 FAM171BQ6P995 826 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 TMC7Q7Z402 723 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 DRAXINQ8NBI3 349 aaPredicted RBP14.8□□□□□ -0.04
MINDY4-202ENST00000409881 FBXO22Q8NEZ5 403 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 ATG4AQ8WYN0 398 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 SAMD11Q96NU1 681 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 PGLYRP2Q96PD5 576 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 PKMYT1Q99640 499 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 EPAS1Q99814 870 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 GORASP1Q9BQQ3 440 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 ZNF518BQ9C0D4 1074 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 SLC28A3Q9HAS3 691 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 ENTPD7Q9NQZ7 604 aa14.8□□□□□ -0.04
MINDY4-202ENST00000409881 METTL5Q9NRN9 209 aaKnown RBP14.8□□□□□ -0.04
MINDY4-202ENST00000409881 FAM47DPA6NHR8 397 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 C5orf67F2Z3F1 127 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 ADAM12O43184 909 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 RB1P06400 928 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 HADHBP55084 474 aaKnown RBP14.79□□□□□ -0.04
MINDY4-202ENST00000409881 MAPRE1Q15691 268 aaKnown RBP14.79□□□□□ -0.04
MINDY4-202ENST00000409881 CLEC16AQ2KHT3 1053 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 TRIM72Q6ZMU5 477 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 TTC30AQ86WT1 665 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 SPATA2LQ8IUW3 424 aaPredicted RBP14.79□□□□□ -0.04
MINDY4-202ENST00000409881 SPPL3Q8TCT6 385 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 POF1BQ8WVV4 589 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 CPA5Q8WXQ8 436 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 EZH1Q92800 747 aaPredicted RBP14.79□□□□□ -0.04
MINDY4-202ENST00000409881 C9orf72Q96LT7 481 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 HNRNPABQ99729 332 aaKnown RBP14.79□□□□□ -0.04
MINDY4-202ENST00000409881 TCF25Q9BQ70 676 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 RHOBTB2Q9BYZ6 727 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 PRO3102Q9H379 93 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 DCLRE1BQ9H816 532 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 KRT82Q9NSB4 513 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 PCMTD2Q9NV79 361 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.79□□□□□ -0.04
MINDY4-202ENST00000409881 SCOCQ9UIL1 159 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 BACE2Q9Y5Z0 518 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 PLXNA4Q9HCM2 1894 aa14.79□□□□□ -0.04
MINDY4-202ENST00000409881 TBC1D4O60343 1298 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 CDH16O75309 829 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 DCTN3O75935 186 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 PYGLP06737 847 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 CTSAP10619 480 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 OR1D2P34982 312 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 VHLP40337 213 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 SSR1P43307 286 aaKnown RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 TBC1D25Q3MII6 688 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 FAM35AQ86V20 835 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 TMEM35BQ8NCS4 154 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 B4GALNT2Q8NHY0 566 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ARNTL2Q8WYA1 636 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 CD101Q93033 1021 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 IFT43Q96FT9 208 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 LRRC19Q9H756 370 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ABI2Q9NYB9 513 aaPredicted RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 LGALS13Q9UHV8 139 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 GRID1Q9ULK0 1009 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 LZTS1Q9Y250 596 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 SIGLEC16A6NMB1 481 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 GRM6O15303 877 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ASMTLO95671 621 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 CYP1A1P04798 512 aaPredicted RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ITIH2P19823 946 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 DNAJB1P25685 340 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ERVFC1P60507 584 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 NOMO3P69849 1222 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 GPM6BQ13491 265 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 RCN1Q15293 331 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 SNX30Q5VWJ9 437 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 PLPP4Q5VZY2 271 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 PAQR9Q6ZVX9 377 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 ZC3H18Q86VM9 953 aaKnown RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 NRG4Q8WWG1 115 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 SCG3Q8WXD2 468 aaKnown RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 SNF8Q96H20 258 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 MIPEPQ99797 713 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 CLSTN3Q9BQT9 956 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 OXCT2Q9BYC2 517 aaPredicted RBP14.78□□□□□ -0.04
MINDY4-202ENST00000409881 TLR9Q9NR96 1032 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 STOML1Q9UBI4 398 aa14.78□□□□□ -0.04
MINDY4-202ENST00000409881 CXCL14O95715 111 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 LSM8O95777 96 aaKnown RBP14.77□□□□□ -0.04
MINDY4-202ENST00000409881 FAM200BP0CF97 657 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 BDNFP23560 247 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 NSFP46459 744 aaKnown RBP14.77□□□□□ -0.04
MINDY4-202ENST00000409881 RASSF2P50749 326 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 BCAT1P54687 386 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 ROR1Q01973 937 aa14.77□□□□□ -0.04
MINDY4-202ENST00000409881 NFE2Q16621 373 aaPredicted RBP14.77□□□□□ -0.04
MINDY4-202ENST00000409881 C12orf50Q8NA57 414 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms