RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 TAGLN3Q9UI15 199 aa16.89■□□□□ 0.3
PTPRN2-205ENST00000409483 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.3
PTPRN2-205ENST00000409483 DNAJC8O75937 253 aaPredicted RBP16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 ARL2P36404 184 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 SLC39A12Q504Y0 691 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 GPR142Q7Z601 462 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 SRP72O76094 671 aaKnown RBP16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 BST1Q10588 318 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 DEFB128Q7Z7B8 93 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 TRABD2AQ86V40 505 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 TNS4Q8IZW8 715 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 SPATA6LQ8N4H0 392 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 EFCAB3Q8N7B9 438 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 SH3TC2Q8TF17 1288 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 AGAP11Q8TF27 550 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 NR2E3Q9Y5X4 410 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 RAD51Q06609 339 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 CDH17Q12864 832 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 KRT33BQ14525 404 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 ACAP1Q15027 740 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 SPDYCQ5MJ68 293 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 MARC1Q5VT66 337 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 IQSEC1Q6DN90 963 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 LPIN3Q9BQK8 851 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 CACYBPQ9HB71 228 aaKnown RBP16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 PIDD1Q9HB75 910 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 ZNF536O15090 1300 aa16.89■□□□□ 0.29
PTPRN2-205ENST00000409483 C5P01031 1676 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 F5H5T6 163 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ENTPD5O75356 428 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 NPR3P17342 541 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 SH3PXD2AQ5TCZ1 1133 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 FAM171A1Q5VUB5 890 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 SMARCD1Q96GM5 515 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ST6GALNAC4Q9H4F1 302 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 MRPL40Q9NQ50 206 aaKnown RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 GRHL1Q9NZI5 618 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ZMYM2Q9UBW7 1377 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 XPO1O14980 1071 aaKnown RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 CDH18Q13634 790 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 SYNDIG1LA6NDD5 238 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ALDH1A3P47895 512 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ZNF177Q13360 481 aaPredicted RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 GALNTL6Q49A17 601 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ZDHHC17Q8IUH5 632 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 HS6ST3Q8IZP7 471 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 CENPTQ96BT3 561 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 TCF7L2Q9NQB0 619 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 MAN1C1Q9NR34 630 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 MAFBQ9Y5Q3 323 aaPredicted RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 PGAM1P18669 254 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 NOS2P35228 1153 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 PTGIRP43119 386 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 NR2C2P49116 596 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 TXNRD3NBQ6F5E7 133 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 UNC5AQ6ZN44 842 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 NAF1Q96HR8 494 aaKnown RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 HAUS8Q9BT25 410 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 ACSS3Q9H6R3 686 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 DMAP1Q9NPF5 467 aaPredicted RBP16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 XPNPEP3Q9NQH7 507 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 CRYL1Q9Y2S2 319 aa16.88■□□□□ 0.29
PTPRN2-205ENST00000409483 A0A0A0MRY4 1105 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 F8W8V4 182 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 NFKBIEO00221 500 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 ALOX15BO15296 676 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 VNN1O95497 513 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 PYGLP06737 847 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 MRNIPQ6NTE8 343 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 PMF1Q6P1K2 205 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 IZUMO2Q6UXV1 221 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 XYLT1Q86Y38 959 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 ANKRD52Q8NB46 1076 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 CYGBQ8WWM9 190 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 SPATA13Q96N96 652 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 PCDH18Q9HCL0 1135 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 DPYSL4O14531 572 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 SERPINE1P05121 402 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 ERCC2P18074 760 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 ITGB6P18564 788 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 GRK2P25098 689 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 FSTL1Q12841 308 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 KPNB1Q14974 876 aaKnown RBP16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 TTC30AQ86WT1 665 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 GPR152Q8TDT2 470 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 CNBD2Q96M20 576 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 NRCAMQ92823 1304 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 ZBTB24O43167 697 aaPredicted RBP16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 SLC2A3P11169 496 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 NFKB1P19838 968 aa16.87■□□□□ 0.29
PTPRN2-205ENST00000409483 CDKN2BP42772 138 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms