RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ABCB8Q9NUT2 735 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 PPP4R2Q9NY27 417 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 TFIP11Q9UBB9 837 aaKnown RBP17.44■□□□□ 0.38
CHMP3-203ENST00000409225 STRIP2Q9ULQ0 834 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 USP3Q9Y6I4 520 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 DLG4P78352 724 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 CLDN10P78369 228 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 SPACA3Q8IXA5 215 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 FAM217AQ8IXS0 508 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 TAF4BQ92750 862 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 SKA1Q96BD8 255 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 DHX58Q96C10 678 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 SLC39A2Q9NP94 309 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 AASDHPPTQ9NRN7 309 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 CGNQ9P2M7 1197 aaKnown RBP17.43■□□□□ 0.38
CHMP3-203ENST00000409225 NCKAP1Q9Y2A7 1128 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 MYLKQ15746 1914 aa17.43■□□□□ 0.38
CHMP3-203ENST00000409225 A0A1W2PPC4 97 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 CAPN8A6NHC0 703 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 ASS1P00966 412 aaKnown RBP17.42■□□□□ 0.38
CHMP3-203ENST00000409225 RPN1P04843 607 aaKnown RBP17.42■□□□□ 0.38
CHMP3-203ENST00000409225 C7P10643 843 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 CASP1P29466 404 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 ACTN2P35609 894 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 PIK3CAP42336 1068 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 ADIPOR2Q86V24 386 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 ZC3H3Q8IXZ2 948 aaKnown RBP17.42■□□□□ 0.38
CHMP3-203ENST00000409225 TSC1Q92574 1164 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 GOLGA1Q92805 767 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 PLD4Q96BZ4 506 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 USP28Q96RU2 1077 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 NT5C1AQ9BXI3 368 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 DUSP16Q9BY84 665 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 MTG2Q9H4K7 406 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 EBF2Q9HAK2 575 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 GGA2Q9UJY4 613 aa17.42■□□□□ 0.38
CHMP3-203ENST00000409225 ERVH48-1M5A8F1 160 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 DLDP09622 509 aaKnown RBP17.41■□□□□ 0.38
CHMP3-203ENST00000409225 CD58P19256 250 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 GLDCP23378 1020 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 EPHA8P29322 1005 aaPredicted RBP17.41■□□□□ 0.38
CHMP3-203ENST00000409225 GALCP54803 685 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 EHHADHQ08426 723 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 INCA1Q0VD86 236 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 KNOP1Q1ED39 458 aaKnown RBP17.41■□□□□ 0.38
CHMP3-203ENST00000409225 TBC1D25Q3MII6 688 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 ZACNQ401N2 412 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 PPP1R26Q5T8A7 1209 aaPredicted RBP17.41■□□□□ 0.38
CHMP3-203ENST00000409225 MBLAC2Q68D91 279 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 NCEH1Q6PIU2 408 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 UNC13DQ70J99 1090 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 ERICH1Q86X53 443 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 NAF1Q96HR8 494 aaKnown RBP17.41■□□□□ 0.38
CHMP3-203ENST00000409225 C7orf25Q9BPX7 421 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 BLZF1Q9H2G9 400 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 PABPC3Q9H361 631 aaKnown RBP17.41■□□□□ 0.38
CHMP3-203ENST00000409225 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 GDF3Q9NR23 364 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 FBXL12Q9NXK8 326 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 SERGEFQ9UGK8 458 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 SUN2Q9UH99 717 aa17.41■□□□□ 0.38
CHMP3-203ENST00000409225 PYCARD-AS1I3L0S3 204 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 WNT9AO14904 365 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 YKT6O15498 198 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 HLA-DRAP01903 254 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 PABPC1P11940 636 aaKnown RBP17.4■□□□□ 0.38
CHMP3-203ENST00000409225 CD38P28907 300 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 YWHAGP61981 247 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHMP3-203ENST00000409225 PDE4CQ08493 712 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 KCNH2Q12809 1159 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 BNIP3Q12983 259 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 CNNM4Q6P4Q7 775 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 USP30Q70CQ3 517 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 SV2AQ7L0J3 742 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 AHI1Q8N157 1196 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 ARHGAP18Q8N392 663 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHMP3-203ENST00000409225 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
CHMP3-203ENST00000409225 LGMNQ99538 433 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 MORC2Q9Y6X9 1032 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-203ENST00000409225 NAV2Q8IVL1 2488 aa17.4■□□□□ 0.38
CHMP3-203ENST00000409225 MGAQ8IWI9 3026 aa17.39■□□□□ 0.38
CHMP3-203ENST00000409225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 ATP5BP06576 529 aaKnown RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 ARRB1P49407 418 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 HARS2P49590 506 aaKnown RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 TRIP4Q15650 581 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 C8orf34Q49A92 452 aa17.39■□□□□ 0.37
CHMP3-203ENST00000409225 KIAA0907Q7Z7F0 614 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 FMNL3Q8IVF7 1028 aa17.39■□□□□ 0.37
CHMP3-203ENST00000409225 GOLGA5Q8TBA6 731 aa17.39■□□□□ 0.37
CHMP3-203ENST00000409225 RSPH9Q9H1X1 276 aaPredicted RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 APOBEC3GQ9HC16 384 aaKnown RBP17.39■□□□□ 0.37
CHMP3-203ENST00000409225 CLCA2Q9UQC9 943 aa17.39■□□□□ 0.37
CHMP3-203ENST00000409225 A0A1W2PP55 124 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 A0A1W2PR77 199 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 LRRC72A6NJI9 287 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 MID1O15344 667 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms