RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PM20D1Q6GTS8 502 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 PIGZQ86VD9 579 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 DENND1CQ8IV53 801 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 CPXM2Q8N436 756 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 ANKRD52Q8NB46 1076 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 FBXL13Q8NEE6 735 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 TATDN2Q93075 761 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 TOE1Q96GM8 510 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 ELOVL2Q9NXB9 296 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 MARCH2Q9P0N8 246 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 USP36Q9P275 1121 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 ZDHHC9Q9Y397 364 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 RAI2Q9Y5P3 530 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 COL12A1Q99715 3063 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 A0A1W2PQ27 194 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 A0A1W2PQ64 194 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 CETN3O15182 167 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 TIMM44O43615 452 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 SYNCRIPO60506 623 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 GJB3O75712 270 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF202O95125 648 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ZBED1O96006 694 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 OXTRP30559 389 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 MXI1P50539 228 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 TPMTP51580 245 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 TKTL1P51854 596 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF234Q14588 700 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF423Q2M1K9 1284 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 RSRC2Q7L4I2 434 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 TMPRSS6Q8IU80 811 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF843Q8N446 348 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 CADM4Q8NFZ8 388 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 PIP4K2CQ8TBX8 421 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 DDI1Q8WTU0 396 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 DNASE2BQ8WZ79 361 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 SIPA1Q96FS4 1042 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 EEF2KMTQ96G04 330 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ARID3AQ99856 593 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 GPR174Q9BXC1 333 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC2A11Q9BYW1 496 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 ZDHHC5Q9C0B5 715 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 SCAND2PQ9GZW5 306 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 MKRN2Q9H000 416 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 CLEC4EQ9ULY5 219 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 NFE2L3Q9Y4A8 694 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 KNL1Q8NG31 2342 aa9.59□□□□□ -0.87
NIF3L1-203ENST00000409129 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.88
NIF3L1-203ENST00000409129 A0A1B0GTW7 788 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 METTL12A8MUP2 240 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 MEI4A8MW99 385 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 KCNJ18B7U540 433 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 SH3BP5O60239 455 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 EPB41P11171 864 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 ACADMP11310 421 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 NCAM1P13591 858 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 HARS2P49590 506 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 COPAP53621 1224 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 EIF4HQ15056 248 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 TRIP4Q15650 581 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 TRIP6Q15654 476 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 MPPE1Q53F39 396 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 TMEM215Q68D42 235 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 ZNF605Q86T29 641 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 FMNL3Q8IVF7 1028 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 FAM217AQ8IXS0 508 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 RBBP8NLQ8NC74 664 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 ADAMTS14Q8WXS8 1223 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 SORCS1Q8WY21 1168 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 NDRG1Q92597 394 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 PRCCQ92733 491 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 UBL7Q96S82 380 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 NUP58Q9BVL2 599 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 ULBP1Q9BZM6 244 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 CIPCQ9C0C6 399 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 GOLPH3LQ9H4A5 285 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 OLA1Q9NTK5 396 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 PCDHB9Q9Y5E1 797 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 DOPEY2Q9Y3R5 2298 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 KNTC1P50748 2209 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 CABIN1Q9Y6J0 2220 aa9.58□□□□□ -0.88
NIF3L1-203ENST00000409129 TULP2O00295 520 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 XPO1O14980 1071 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 TSPAN3O60637 253 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 IGLV3-19P01714 112 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 EPHX1P07099 455 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 PRKCHP24723 683 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 ITPKBP27987 946 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 BCAT1P54687 386 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 ARID5AQ03989 594 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 CYP4F3Q08477 520 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 PDE4CQ08493 712 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 GRIK2Q13002 908 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms