RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 RRN3Q9NYV6 651 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 GGA2Q9UJY4 613 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 INVSQ9Y283 1065 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PAXBP1Q9Y5B6 917 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 THADAQ6YHU6 1953 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 KCNJ18B7U540 433 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 E5RJQ4 531 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 PIK3R2O00459 728 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 GDF9O60383 454 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 TSPAN3O60637 253 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 TBL1XO60907 577 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 MBD3O95983 291 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 EPHX1P07099 455 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 PON1P27169 355 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 CD6P30203 668 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 IL12RB1P42701 662 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 ZBTB16Q05516 673 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF33AQ06730 810 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 KCNJ12Q14500 433 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF234Q14588 700 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 CCDC6Q16204 474 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 DUOXA1Q1HG43 343 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 DPCR1Q3MIW9 517 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 FUT11Q495W5 492 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 TRIM61Q5EBN2 209 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 RABGAP1LQ5R372 815 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 KIAA1211LQ6NV74 962 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 DENND1BQ6P3S1 775 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC23A3Q6PIS1 610 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 CHST9Q7L1S5 443 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 TAC4Q86UU9 113 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 MFN1Q8IWA4 741 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 TMEFF1Q8IYR6 380 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 KDM1BQ8NB78 822 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 C1orf131Q8NDD1 294 aaKnown RBP9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 CADM4Q8NFZ8 388 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 CLEC4CQ8WTT0 213 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 PPP1R13BQ96KQ4 1090 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 BTN2A3PQ96KV6 586 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 FCRL2Q96LA5 508 aaPredicted RBP9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 MRGPRX1Q96LB2 322 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 ACOX2Q99424 681 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 SUN2Q9UH99 717 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 DNAJC12Q9UKB3 198 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC6A14Q9UN76 642 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 CYP8B1Q9UNU6 501 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 NFE2L3Q9Y4A8 694 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 RAD54BQ9Y620 910 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 NUP205Q92621 2012 aa9.43□□□□□ -0.9
SNORD88A-201ENST00000408314 IGHV1OR15-9A0A0B4J2B8 117 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 MED19A0JLT2 244 aaPredicted RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 LNP1A1A4G5 178 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 MEI4A8MW99 385 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 F5H5T6 163 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 PAPSS1O43252 624 aaPredicted RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 RNASEH1O60930 286 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 LSM8O95777 96 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 TRUB2O95900 331 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 CFIP05156 583 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 SYPP08247 313 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ADRB1P08588 477 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 DLDP09622 509 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ABCB4P21439 1286 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 HLA-FP30511 346 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 CCR1P32246 355 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 GFPT1Q06210 699 aaPredicted RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC12A1Q13621 1099 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 RAPGEF1Q13905 1077 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 FAM133BQ5BKY9 247 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 RNF219Q5W0B1 726 aaPredicted RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 LRSAM1Q6UWE0 723 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 C11orf57Q6ZUT1 292 aaPredicted RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 SND1Q7KZF4 910 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ARMCX6Q7L4S7 300 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 CHSY1Q86X52 802 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 TMPRSS6Q8IU80 811 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 IRF2BP1Q8IU81 584 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 TMEM35BQ8NCS4 154 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 OR2T3Q8NH03 318 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 FIBINQ8TAL6 211 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ENOX1Q8TC92 643 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 RNF34Q969K3 372 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC39A13Q96H72 371 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 HSPA12BQ96MM6 686 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 NUP58Q9BVL2 599 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 LSM14BQ9BX40 385 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ZDHHC5Q9C0B5 715 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 CD248Q9HCU0 757 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ABCB8Q9NUT2 735 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 USP36Q9P275 1121 aaKnown RBP9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 MBD1Q9UIS9 605 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms