RNA–Protein interactions for RNA: ENST00000407319.6

TRIOBP-205, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-205ENST00000407319 QKIQ96PU8 341 aaKnown RBP eCLIP28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 TACO1Q9BSH4 297 aaKnown RBP28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 TSPYL2Q9H2G4 693 aaPredicted RBP28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 AP4E1Q9UPM8 1137 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 TRIM33Q9UPN9 1127 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 SYCP2LQ5T4T6 812 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 STRADAQ7RTN6 431 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 NLRP9Q7RTR0 991 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 ZNF598Q86UK7 904 aaKnown RBP28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 VPS52Q8N1B4 723 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 CLEC4CQ8WTT0 213 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 TMEM237Q96Q45 408 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 DHX35Q9H5Z1 703 aaKnown RBP28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 PLAC1Q9HBJ0 212 aa28.12■■■□□ 2.09
TRIOBP-205ENST00000407319 HGSO14964 777 aaPredicted RBP28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 XPOTO43592 962 aaKnown RBP28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 APRTP07741 180 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 EZRP15311 586 aaKnown RBP28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 KCNE1P15382 129 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 GNL1P36915 607 aaPredicted RBP28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 FAXCQ5TGI0 409 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 SLC24A5Q71RS6 500 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 CEP57Q86XR8 500 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 SEPT8Q92599 483 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 LPIN3Q9BQK8 851 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 PRDM16Q9HAZ2 1276 aa28.11■■■□□ 2.09
TRIOBP-205ENST00000407319 WDR91A4D1P6 747 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 KPNA7A9QM74 516 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 KRT37O76014 449 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 CXCL10P02778 98 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 CCDC130P13994 396 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 SCNN1GP51170 649 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 GBE1Q04446 702 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 SLC10A2Q12908 348 aaPredicted RBP28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 LGSNQ5TDP6 509 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 HACE1Q8IYU2 909 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 CSPG4P5Q96PW8 444 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 KCTD15Q96SI1 283 aaPredicted RBP28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 TTC3P53804 2025 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 TGDSO95455 350 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 APOEP02649 317 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 SNRPAP09012 282 aaKnown RBP28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 PYGBP11216 843 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 ADORA2BP29275 332 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 ZNF534Q76KX8 674 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 PPP1R10Q96QC0 940 aaKnown RBP28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 FTHL17Q9BXU8 183 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 C12orf65Q9H3J6 166 aaKnown RBP28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 NPHS2Q9NP85 383 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 MKS1Q9NXB0 559 aa28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.1■■■□□ 2.09
TRIOBP-205ENST00000407319 ENPP3O14638 875 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 METTL18O95568 372 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 PPM1NQ8N819 430 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 SNX25Q9H3E2 840 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 RCOR3Q9P2K3 495 aaPredicted RBP28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 INPP5FQ9Y2H2 1132 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 GIT1Q9Y2X7 761 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 USP3Q9Y6I4 520 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 KLF11O14901 512 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 HCRTO43612 131 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 WFS1O76024 890 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 MAP3K6O95382 1288 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 EFHC1Q5JVL4 640 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 PSTKQ8IV42 348 aaKnown RBP28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 PTPRN2Q92932 1015 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 SIGLEC10Q96LC7 697 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 TSSK1BQ9BXA7 367 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 XAB2Q9HCS7 855 aaKnown RBP28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 SAR1AQ9NR31 198 aa28.09■■■□□ 2.09
TRIOBP-205ENST00000407319 TRIM49D1C9J1S8 452 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 POMCP01189 267 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 PDGFRBP09619 1106 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 T-ENOLP0DO92 83 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 LCP1P13796 627 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 LMO2P25791 158 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 CCNFP41002 786 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 ATXN1P54253 815 aaKnown RBP28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 SEMA5AQ13591 1074 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 FAM111AQ96PZ2 611 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 EBNA1BP2Q99848 306 aaKnown RBP28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 TRIM55Q9BYV6 548 aa28.08■■■□□ 2.09
TRIOBP-205ENST00000407319 HACD1B0YJ81 288 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 TRAFD1O14545 582 aaPredicted RBP28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 SPTLC1O15269 473 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 CCND1P24385 295 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 IGFBP6P24592 240 aaPredicted RBP28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 TAF6P49848 677 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 RASSF2P50749 326 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 PRKD1Q15139 912 aaPredicted RBP28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 NCBP2-AS2Q69YL0 99 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 KCNT2Q6UVM3 1135 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 UNC5AQ6ZN44 842 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 CTAGE3PQ8IX95 158 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 AGAP11Q8TF27 550 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 MTBPQ96DY7 904 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 OLFM3Q96PB7 478 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 KANSL3Q9P2N6 904 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 STK38LQ9Y2H1 464 aa28.07■■■□□ 2.08
TRIOBP-205ENST00000407319 CXorf49A8MYA2 514 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms