RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NBNO60934 754 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 SLC5A3P53794 718 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 SEMA5AQ13591 1074 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 DENND5BQ6ZUT9 1274 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 NETO2Q8NC67 525 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 DBF4BQ8NFT6 615 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 CFAP36Q96G28 342 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 P2RY11Q96G91 374 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 PAFAH2Q99487 392 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 PRDM12Q9H4Q4 367 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 SEPT10Q9P0V9 454 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 NR2E3Q9Y5X4 410 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 PTPRDP23468 1912 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 NLRC5Q86WI3 1866 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 RNF103O00237 685 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 OPHN1O60890 802 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 ZNF189O75820 626 aaPredicted RBP25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 SARNPP82979 210 aaKnown RBP25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 MPP2Q14168 576 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 QPCTQ16769 361 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 BTBD8Q5XKL5 378 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 ADGRD1Q6QNK2 874 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 COLGALT1Q8NBJ5 622 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 SH3TC2Q8TF17 1288 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 LRRC39Q96DD0 335 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 ABCC13Q9NSE7 274 aa25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 ABI2Q9NYB9 513 aaPredicted RBP25.44■■□□□ 1.66
DNMT3A-206ENST00000406659 AMHP03971 560 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 PLEKHG4Q58EX7 1191 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 FAM126BQ8IXS8 530 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 SEPT8Q92599 483 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 SMC6Q96SB8 1091 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 DHRS4Q9BTZ2 278 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 OR12D3Q9UGF7 316 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 TRIM17Q9Y577 477 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 HTTP42858 3142 aa25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 ZNF638Q14966 1978 aaKnown RBP25.43■■□□□ 1.66
DNMT3A-206ENST00000406659 DNM1LO00429 736 aa25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 TNFRSF10BO14763 440 aa25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 SYN3O14994 580 aa25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 VIMP08670 466 aaKnown RBP25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 NFE2Q16621 373 aaPredicted RBP25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 AGGF1Q8N302 714 aaeCLIP25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 XAB2Q9HCS7 855 aaKnown RBP25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 ZC3H7BQ9UGR2 993 aaKnown RBP25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 LRFN2Q9ULH4 789 aa25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 RRP15Q9Y3B9 282 aaKnown RBP25.42■■□□□ 1.66
DNMT3A-206ENST00000406659 FAM47DPA6NHR8 397 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 CPP00450 1065 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 STX2P32856 288 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 LRRC34Q8IZ02 419 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 UNC93B1Q9H1C4 597 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 MLXIPLQ9NP71 852 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 GGA2Q9UJY4 613 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 SNX10Q9Y5X0 201 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 IKBKGQ9Y6K9 419 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 PATJQ8NI35 1801 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 TCRBV9S1A1TA0A576 114 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 NCAM2O15394 837 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 SPAG7O75391 227 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 CDK16Q00536 496 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 VARS2Q5ST30 1063 aaKnown RBP25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 GKAP1Q5VSY0 366 aaPredicted RBP25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 GDAP1Q8TB36 358 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 DCAKDQ8WVC6 231 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 SEC16BQ96JE7 1060 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 SMG5Q9UPR3 1016 aaKnown RBP25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 FAM169AQ9Y6X4 670 aa25.41■■□□□ 1.66
DNMT3A-206ENST00000406659 PIAS1O75925 651 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 GSTA2P09210 222 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 GPNMBQ14956 572 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 SRLQ86TD4 932 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 CEP57Q86XR8 500 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 CKAP2Q8WWK9 683 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 SGSM3Q96HU1 749 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 FUBP3Q96I24 572 aaKnown RBP eCLIP25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 CASD1Q96PB1 797 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 BRD8Q9H0E9 1235 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 NSRP1Q9H0G5 558 aaKnown RBP25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 OSBPL2Q9H1P3 480 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 ADAM28Q9UKQ2 775 aa25.4■■□□□ 1.66
DNMT3A-206ENST00000406659 F5H423 210 aaPredicted RBP25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 PRPF4O43172 522 aaKnown RBP eCLIP25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 IGLV3-25P01717 112 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 EPHB2P29323 1055 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 GBP2P32456 591 aaPredicted RBP25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 CYP2C18P33260 490 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 MAGEA3P43357 314 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 PARP6Q2NL67 630 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 CTXN3Q4LDR2 81 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 FAM171A1Q5VUB5 890 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 TP53INP2Q8IXH6 220 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 CACNA2D3Q8IZS8 1091 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 PCDHB5Q9Y5E4 795 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 MAD1L1Q9Y6D9 718 aa25.39■■□□□ 1.66
DNMT3A-206ENST00000406659 COL4A4P53420 1690 aaPredicted RBP25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 A0A1W2PPM1 405 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 PITPNM1O00562 1244 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 TRDMT1O14717 391 aaKnown RBP25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 IRAK2O43187 625 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms