RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ARHGEF38Q9NXL2 777 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PPME1Q9Y570 386 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 RGL2O15211 777 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 P4HA1P13674 534 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 KCNA2P16389 499 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 RPL5P46777 297 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 AMHR2Q16671 573 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 DUS1LQ6P1R4 473 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 KYAT3Q6YP21 454 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 VSIG10LQ86VR7 867 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 LILRA2Q8N149 483 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PYROXD2Q8N2H3 581 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PCDH20Q8N6Y1 951 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 TRIML2Q8N7C3 387 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 C7orf31Q8N865 590 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CCNYQ8ND76 341 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 RCN3Q96D15 328 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PRICKLE1Q96MT3 831 aaPredicted RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 SORT1Q99523 831 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 EBNA1BP2Q99848 306 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PKP2Q99959 881 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ARHGAP26Q9UNA1 814 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 DOLKQ9UPQ8 538 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CROCCQ5TZA2 2017 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 SIPA1L1O43166 1804 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ANKRD12Q6UB98 2062 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 A0A0J9YVX5 310 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 TMX2-CTNND1H3BSU7 103 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 APOL1O14791 398 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PLIN3O60664 434 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 LTFP02788 710 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ITGB3P05106 788 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CDK4P11802 303 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PTPN1P18031 435 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ASPAP45381 313 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 HDAC4P56524 1084 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CLDN10P78369 228 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 KLF10Q13118 480 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 EEF1DP3Q658K8 133 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 LRRC8BQ6P9F7 803 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 KCNT2Q6UVM3 1135 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CYP2R1Q6VVX0 501 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 MIPOL1Q8TD10 442 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 NCSTNQ92542 709 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CMTM5Q96DZ9 223 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 SGF29Q96ES7 293 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ZNF302Q9NR11 478 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ADA2Q9NZK5 511 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 SF3B1O75533 1304 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 DNAH12Q6ZR08 3092 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 BOLA2-SMG1P6H3BVE0 249 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 CHADO15335 359 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 STAMBPO95630 424 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 HDCP19113 662 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 IL4RP24394 825 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 MPSTP25325 297 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 CCND2P30279 289 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 SLC5A2P31639 672 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 AVPR1AP37288 418 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 PSMD7P51665 324 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 HPCAP84074 193 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 HNRNPDQ14103 355 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF667Q5HYK9 610 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 SLFN12LQ6IEE8 588 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 FAM183BPQ6ZVS7 135 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 TP53INP2Q8IXH6 220 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 DTNBP1Q96EV8 351 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 NPAS2Q99743 824 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ELOVL4Q9GZR5 314 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 PCDHAC1Q9H158 963 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 SLC38A10Q9HBR0 1119 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ASNSD1Q9NWL6 643 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 SCN9AQ15858 1988 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 FOCADQ5VW36 1801 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 HCRTO43612 131 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 CCNT2O60583 730 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 LSM8O95777 96 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ASNSP08243 561 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 RGS2P41220 211 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 IGBP1P78318 339 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 CNTN2Q02246 1040 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 PPIDQ08752 370 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 SNAPC2Q13487 334 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 TFDP2Q14188 446 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 XKR3Q5GH77 459 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 AAGABQ6PD74 315 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 RTKN2Q8IZC4 609 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 MYO1HQ8N1T3 1032 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 KLHL23Q8NBE8 558 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ACVR1CQ8NER5 493 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 RIN3Q8TB24 985 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ACTRT2Q8TDY3 377 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 FAM151AQ8WW52 585 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 NDRG1Q92597 394 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ATP2A3Q93084 1043 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 AGAP2Q99490 1192 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 PDLIM7Q9NR12 457 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF277Q9NRM2 450 aaPredicted RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 RPS6KL1Q9Y6S9 549 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms