RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 UBE2OQ9C0C9 1292 aaKnown RBP24.29■■□□□ 1.48
TRIOBP-203ENST00000403663 PSTPIP1O43586 416 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 CYP1A1P04798 512 aaPredicted RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 AMPD1P23109 780 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 CNPY1Q3B7I2 92 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 EFHC2Q5JST6 749 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 LRRC6Q86X45 466 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 COLGALT2Q8IYK4 626 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 ADGRF2Q8IZF7 708 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 ARHGAP18Q8N392 663 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 FAM81AQ8TBF8 368 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 NCSTNQ92542 709 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 HEXIM2Q96MH2 286 aaKnown RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 VPS11Q9H270 941 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 C12orf65Q9H3J6 166 aaKnown RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 HUS1O60921 280 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 ZCCHC18P0CG32 403 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 ESRRAP11474 423 aaPredicted RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 GEMIN4P57678 1058 aaKnown RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 IKBKEQ14164 716 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 SEPT7Q16181 437 aaKnown RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 RHOT1Q8IXI2 618 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 KATNAL2Q8IYT4 538 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 URGCPQ8TCY9 931 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 DTNBP1Q96EV8 351 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 NT5C1AQ9BXI3 368 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 TMEM120AQ9BXJ8 343 aa24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 MTO1Q9Y2Z2 717 aaKnown RBP24.28■■□□□ 1.48
TRIOBP-203ENST00000403663 COL4A6Q14031 1691 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 LIASO43766 372 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 ETS1P14921 441 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 NOMO3P69849 1222 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 ZBTB16Q05516 673 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 ZC3H12AQ5D1E8 599 aaKnown RBP24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 DENND1BQ6P3S1 775 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 ABI1Q8IZP0 508 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 WDTC1Q8N5D0 677 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 FAM210AQ96ND0 272 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 SPATA16Q9BXB7 569 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 SLC17A7Q9P2U7 560 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 DNPEPQ9ULA0 475 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 PTPRSQ13332 1948 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 ARSEP51690 589 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 RAP1GDS1P52306 607 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 GPX6P59796 221 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 RASIP1Q5U651 963 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 TSSK1BQ9BXA7 367 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 FAM49BQ9NUQ9 324 aa24.27■■□□□ 1.48
TRIOBP-203ENST00000403663 TM9SF1O15321 606 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 ACAT1P24752 427 aaKnown RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 PGM1P36871 562 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 GNL1P36915 607 aaPredicted RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 DEFB103AP81534 67 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 GPS1Q13098 491 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 MORF4L2Q15014 288 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 EFTUD2Q15029 972 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■■■□ 22.1
TRIOBP-203ENST00000403663 LRRC23Q53EV4 343 aaPredicted RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 TTC7BQ86TV6 843 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 TUBGCP5Q96RT8 1024 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 NRDE2Q9H7Z3 1164 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 ARHGEF4Q9NR80 690 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 ANGPTL2Q9UKU9 493 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 PRG3Q9Y2Y8 225 aaPredicted RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 DLDP09622 509 aaKnown RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 RFC2P35250 354 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 PBX3P40426 434 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 PDIA2Q13087 525 aaKnown RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 ARMC3Q5W041 872 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 NPAS4Q8IUM7 802 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 TOP6BLQ8N6T0 577 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 EXD1Q8NHP7 514 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 NDNQ99608 321 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 ALG13Q9NP73 1137 aaKnown RBP24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 CYTH4Q9UIA0 394 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 RABGEF1Q9UJ41 708 aa24.26■■□□□ 1.47
TRIOBP-203ENST00000403663 TBKBP1A7MCY6 615 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 OR1G1P47890 313 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 KIAA0319Q5VV43 1072 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 RFX8Q6ZV50 586 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 CENPUQ71F23 418 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 BANPQ8N9N5 519 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 MZB1Q8WU39 189 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 CCDC28BQ9BUN5 200 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 ZNF148Q9UQR1 794 aa24.25■■□□□ 1.47
TRIOBP-203ENST00000403663 F8W8V4 182 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 PDLIM1O00151 329 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 BANF1O75531 89 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 TGDSO95455 350 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 GJC1P36383 396 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 RANBP1P43487 201 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 PSMC1P62191 440 aaKnown RBP24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 PPP1R26Q5T8A7 1209 aaPredicted RBP24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 RNASEH2BQ5TBB1 312 aaKnown RBP24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 FAM117BQ6P1L5 589 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 IZUMO2Q6UXV1 221 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 C16orf59Q7L2K0 433 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 ARHGAP24Q8N264 748 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 ALLCQ8N6M5 410 aa24.24■■□□□ 1.47
TRIOBP-203ENST00000403663 SNX25Q9H3E2 840 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms