RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 DOPEY2Q9Y3R5 2298 aa12.45□□□□□ -0.42
SPTLC1P3-201ENST00000403408 UNC79Q9P2D8 2635 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 AHCTF1Q8WYP5 2266 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 A0A1W2PPC4 97 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SLC12A8A0AV02 714 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 J3QKU1 62 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CHKAP35790 457 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TXLNAP40222 546 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 GALCP54803 685 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ASIC1P78348 528 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 FNDC3BQ53EP0 1204 aaKnown RBP12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PPP1R26Q5T8A7 1209 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 KIAA0895LQ68EN5 471 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SV2AQ7L0J3 742 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CHST9Q7L1S5 443 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 GPR155Q7Z3F1 870 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 FMNL3Q8IVF7 1028 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 DDI1Q8WTU0 396 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 MYEOVQ96EZ4 313 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 C7orf25Q9BPX7 421 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SLC2A11Q9BYW1 496 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 BLZF1Q9H2G9 400 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PNPLA8Q9NP80 782 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SLC39A2Q9NP94 309 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ABCB8Q9NUT2 735 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TDRD6O60522 2096 aaKnown RBP12.44□□□□□ -0.42
SPTLC1P3-201ENST00000403408 KIF26BQ2KJY2 2108 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TEX51A0A1B0GUA7 166 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TULP2O00295 520 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TIMM44O43615 452 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 EXOC3O60645 756 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 HLA-DRAP01903 254 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CD70P32970 193 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 BCAT1P54687 386 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 RACK1P63244 317 aaKnown RBP12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CXADRP78310 365 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 COG7P83436 770 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 INSM1Q01101 510 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TRIP4Q15650 581 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 NCEH1Q6PIU2 408 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 LRRC69Q6ZNQ3 347 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SPATS2Q86XZ4 545 aaKnown RBP12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 FGF11Q92914 225 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 MARCH2Q9P0N8 246 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PCDHB1Q9Y5F3 818 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
SPTLC1P3-201ENST00000403408 UBE4BO95155 1302 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 FAM47DPA6NHR8 397 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 RALAP11233 206 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SNRPFP62306 86 aaKnown RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SGSM1Q2NKQ1 1148 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 RAB41Q5JT25 222 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SFMBT2Q5VUG0 894 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 MBLAC2Q68D91 279 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 UNC13DQ70J99 1090 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ADAT2Q7Z6V5 191 aaKnown RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 DHX58Q96C10 678 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 MRGPRX3Q96LB0 322 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ACE2Q9BYF1 805 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 RSPH9Q9H1X1 276 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 NEUROG2Q9H2A3 272 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PABPC3Q9H361 631 aaKnown RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SGK2Q9HBY8 427 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CPNE5Q9HCH3 593 aa12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 INTS6Q9UL03 887 aaKnown RBP12.42□□□□□ -0.42
SPTLC1P3-201ENST00000403408 UTP20O75691 2785 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 GOLGA6L7A0A1B0GV03 622 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 MID1O15344 667 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 RRP8O43159 456 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SIN3BO75182 1162 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 KIF20AO95235 890 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 DNTTP04053 509 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ITGAVP06756 1048 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 C1SP09871 688 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PABPC1P11940 636 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CD58P19256 250 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 HNF1BP35680 557 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PSEN1P49768 467 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 C21orf59P57076 290 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 NXPH1P58417 271 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 ZBTB16Q05516 673 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CUL4AQ13619 759 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 CUL4BQ13620 913 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 LY6DQ14210 128 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 TBC1D25Q3MII6 688 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
SPTLC1P3-201ENST00000403408 GRAMD1CQ8IYS0 662 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms