RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 CYBBP04839 570 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TACR2P21452 398 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PSMA2P25787 234 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TARSP26639 723 aaKnown RBP17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MRE11P49959 708 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 HDAC4P56524 1084 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 ZNF252P-AS1Q0IIN9 211 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MPPE1Q53F39 396 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MS4A13Q5J8X5 152 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PIK3R6Q5UE93 754 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CWF19L1Q69YN2 538 aaKnown RBP17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 RAD9BQ6WBX8 426 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 BMP8AQ7Z5Y6 402 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CCDC170Q8IYT3 715 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 LGI2Q8N0V4 545 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 ZNF687Q8N1G0 1237 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CTNNBL1Q8WYA6 563 aaPredicted RBP17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CD101Q93033 1021 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 NELL2Q99435 816 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 DDX50Q9BQ39 737 aaKnown RBP17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 SIK2Q9H0K1 926 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MRPS17Q9Y2R5 130 aaKnown RBP17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PAXBP1Q9Y5B6 917 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 SNX10Q9Y5X0 201 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 HS3ST4Q9Y661 456 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 EPN1Q9Y6I3 576 aaPredicted RBP17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 COL4A2P08572 1712 aa17.81■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TRIM24O15164 1050 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TULP3O75386 442 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 LCA5LO95447 670 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PENKP01210 267 aaPredicted RBP17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TMEM253P0C7T8 217 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CYLC1P35663 651 aaPredicted RBP17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 GGCXP38435 758 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MAGEA1P43355 309 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MESP2Q0VG99 397 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TMEM31Q5JXX7 168 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 FSTL4Q6MZW2 842 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 SCYL2Q6P3W7 929 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 C1orf228Q6PIY5 440 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 C14orf80Q86SX3 495 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CHSY1Q86X52 802 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TMEM139Q8IV31 216 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 ETFBKMTQ8IXQ9 262 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CFAP52Q8N1V2 620 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 BTBD6Q96KE9 485 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PRICKLE1Q96MT3 831 aaPredicted RBP17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 XPO6Q96QU8 1125 aaKnown RBP17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PRMT1Q99873 361 aaKnown RBP17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 C1QTNF1Q9BXJ1 281 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TMEM51Q9NW97 253 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 STIM2Q9P246 746 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CTTNBP2NLQ9P2B4 639 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CLEC4EQ9ULY5 219 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 SIT1Q9Y3P8 196 aa17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 KIF26AQ9ULI4 1882 aaPredicted RBP17.8■□□□□ 0.44
PTCHD3P3-201ENST00000403073 EIF3CLB5ME19 914 aaKnown RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CACNG3O60359 315 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TBL1XO60907 577 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 DCNP07585 359 aaKnown RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 ADRA1BP35368 520 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 GSDMDP57764 484 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 RPS24P62847 133 aaKnown RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 KDSRQ06136 332 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 GRSF1Q12849 480 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 FZD5Q13467 585 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 AUHQ13825 339 aaKnown RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 SPA17Q15506 151 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TMEM196Q5HYL7 178 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 ASTLQ6HA08 431 aaPredicted RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 FBXL6Q8N531 539 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 ARFGAP1Q8N6T3 406 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CCDC185Q8N715 623 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PJA1Q8NG27 643 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 FNIP1Q8TF40 1166 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PNKPQ96T60 521 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 EIF3CQ99613 913 aaKnown RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MAGEB5Q9BZ81 275 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 LMAN1LQ9HAT1 526 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 DNAJC17Q9NVM6 304 aaKnown RBP17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 DEC1Q9P2X7 70 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TFR2Q9UP52 801 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PCDHA13Q9Y5I0 950 aa17.79■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MUC3AQ02505 3323 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 TICRRQ7Z2Z1 1910 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 PRR33A8MZF0 331 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 F5H5T6 163 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 NDUFA10O95299 355 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 EGFP01133 1207 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CISD3P0C7P0 127 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CHRNB1P11230 501 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 AOC1P19801 751 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 HOXD9P28356 352 aaPredicted RBP17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CLCN5P51795 746 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 MTA1Q13330 715 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 GSE1Q14687 1217 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 C10orf76Q5T2E6 689 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 FBXL22Q6P050 247 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 SFTPA1Q8IWL2 248 aa17.78■□□□□ 0.44
PTCHD3P3-201ENST00000403073 CCDC105Q8IYK2 499 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms