RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 RHPN2P1A8MT19 583 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 LGALS16A8MUM7 142 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 PSMC3P17980 439 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 RRM2P31350 389 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 BNC1Q01954 994 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 BCL2L1Q07817 233 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 KRR1Q13601 381 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 NAPEPLDQ6IQ20 393 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 RCOR2Q8IZ40 523 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 MCCC1Q96RQ3 725 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 CNPY3Q9BT09 278 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 AK5Q9Y6K8 562 aa11.25□□□□□ -0.61
CACNA1C-210ENST00000399606 CCDC163A0A0D9SF12 145 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 OR7A10O76100 309 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 OR1E1P30953 314 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 KCNJ5P48544 419 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 EXOSC10Q01780 885 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 SPIDRQ14159 915 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 CARTPTQ16568 116 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 SPATA21Q7Z572 469 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 CENPSQ8N2Z9 138 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 ATP6V1G3Q96LB4 118 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 DCLK3Q9C098 648 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 MAP2K7O14733 419 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 SEPT4O43236 478 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 ADH1CP00326 375 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 MASP1P48740 699 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 DGKKQ5KSL6 1271 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 P3H2Q8IVL5 708 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 METTL21AQ8WXB1 218 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PPP1R37O75864 691 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 USP1O94782 785 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 KCNK10P57789 538 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 BTN3A2P78410 334 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 ZNHIT3Q15649 155 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 LINC00523Q86TU6 105 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PCYOX1LQ8NBM8 494 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 CTNNAL1Q9UBT7 734 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 ADAM30Q9UKF2 790 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 OR10H1Q9Y4A9 318 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PCDHGB3Q9Y5G1 929 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PLA2G6O60733 806 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 KATNA1O75449 491 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 TCEA1P23193 301 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 CASP1P29466 404 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PTGER2P43116 358 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 CYP51A1Q16850 503 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 NSUN4Q96CB9 384 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 UVRAGQ9P2Y5 699 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 TCP11X1B4DZS4 312 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 GARTP22102 1010 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 MAPKAPK2P49137 400 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 PIGHQ14442 188 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 MPZL3Q6UWV2 235 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 NPHS2Q9NP85 383 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 GGA2Q9UJY4 613 aa11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 ATXN2Q99700 1313 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-210ENST00000399606 AP5Z1O43299 807 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 AASDHQ4L235 1098 aaPredicted RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM46CQ5VWP2 391 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 HELQQ8TDG4 1101 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 EDEM1Q92611 657 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ARHGEF26Q96DR7 871 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 MYOM1P52179 1685 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 APLP1P51693 650 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ERVK-21P61565 698 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 P4HA3Q7Z4N8 544 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 PRPF39Q86UA1 669 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 SLC35C2Q9NQQ7 365 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 IARS2Q9NSE4 1012 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ENTPD4Q9Y227 616 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 PCDHA11Q9Y5I1 949 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 SNPHO15079 494 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 RTN2O75298 545 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 STXBP1P61764 594 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 PLGLB1Q02325 96 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 CSTF3Q12996 717 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 CCDC137Q6PK04 289 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 CD302Q8IX05 232 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 KLHL28Q9NXS3 571 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 TECPR2O15040 1411 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms