RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 UNC45BQ8IWX7 931 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IRF7Q92985 503 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ATP2A3Q93084 1043 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BTN2A3PQ96KV6 586 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 WDCPQ9H6R7 721 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SPHK2Q9NRA0 654 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HEBP1Q9NRV9 189 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HS3ST4Q9Y661 456 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TECTAO75443 2155 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BTNL10A8MVZ5 291 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HOXC11O43248 304 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PROSCO94903 275 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 NFATC1O95644 943 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PENKP01210 267 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC2A3P11169 496 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IL1R2P27930 398 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MIPP30301 263 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ADRA1BP35368 520 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ARHGAP25P42331 645 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC11A2P49281 568 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MESP2Q0VG99 397 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SCAPQ12770 1279 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ITPRIPL2Q3MIP1 535 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RAP1GAP2Q684P5 730 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TXNRD3NBQ6F5E7 133 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 UBALD2Q8IYN6 164 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ANP32BQ92688 251 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RNF34Q969K3 372 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 NTAN1Q96AB6 310 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IP6K2Q9UHH9 426 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FAM72CH0Y354 149 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MYO1FO00160 1098 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 DCXO43602 365 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TSPAN3O60637 253 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ADH5P11766 374 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TACR2P21452 398 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CTHP32929 405 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 GJA4P35212 333 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PCK1P35558 622 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 OPRD1P41143 372 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MLLT6P55198 1093 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 KRT83P78385 493 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC25A11Q02978 314 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PIGHQ14442 188 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CA9Q16790 459 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FAM72AQ5TYM5 149 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MANEALQ5VSG8 457 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FAM72DQ6L9T8 149 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TPGS1Q6ZTW0 290 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CHSY1Q86X52 802 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FAM72BQ86X60 149 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PYROXD2Q8N2H3 581 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PHTF2Q8N3S3 785 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CPA6Q8N4T0 437 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 EDAQ92838 391 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IGSF8Q969P0 613 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HAPLN3Q96S86 360 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PCSK1NQ9UHG2 260 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FZD10Q9ULW2 581 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CA14Q9ULX7 337 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CLEC4EQ9ULY5 219 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 F5P12259 2224 aa12.85□□□□□ -0.35
HLA-DQB1-203ENST00000399082 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SPECC1L-ADORA2AF8WAN1 911 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TRIM24O15164 1050 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IPO7O95373 1038 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PTMAP06454 111 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MAN1A1P33908 653 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CHKAP35790 457 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TAS2R40P59535 323 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RPS24P62847 133 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PFKPQ01813 784 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SEMA3BQ13214 749 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MESDQ14696 234 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ACAP1Q15027 740 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MLF2Q15773 248 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 C5orf22Q49AR2 442 aa12.84□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms