RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PRICKLE1Q96MT3 831 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 AGPAT1Q99943 283 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 IFNKQ9P0W0 207 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SLC27A6Q9Y2P4 619 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 STARD13Q9Y3M8 1113 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MYO18AQ92614 2054 aaKnown RBP14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
HLA-DQB1-202ENST00000399079 KCNU1A8MYU2 1149 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HRO43593 1189 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TBL1XO60907 577 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GJB6O95452 261 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LMNAP02545 664 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HLA-FP30511 346 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HOXA6P31267 233 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GBP1P32455 592 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PBX1P40424 430 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ZNF445P59923 1031 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RPS24P62847 133 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CENPCQ03188 943 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RAP1GAP2Q684P5 730 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TMEM215Q68D42 235 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LRSAM1Q6UWE0 723 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TRIM72Q6ZMU5 477 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LONP2Q86WA8 852 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CFAP52Q8N1V2 620 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CAMKK1Q8N5S9 505 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 EMC1Q8N766 993 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SUMF1Q8NBK3 374 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 OLIG1Q8TAK6 271 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RNF34Q969K3 372 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 BTN2A3PQ96KV6 586 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NPY6RQ99463 290 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TSPY26PQ9H489 355 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 METTL5Q9NRN9 209 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PIGVQ9NUD9 493 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 STIM2Q9P246 746 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TMEM59LQ9UK28 342 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MYO6Q9UM54 1294 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RIF1Q5UIP0 2472 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 WASH3PC4AMC7 463 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CCR1P32246 355 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SCNN1AP37088 669 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NSFP46459 744 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SULT1E1P49888 294 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ATXN1P54253 815 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PTP4A2Q12974 167 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MS4A13Q5J8X5 152 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CHPFQ8IZ52 775 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LGI2Q8N0V4 545 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RNF214Q8ND24 703 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TSTD1Q8NFU3 115 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NT5C3BQ969T7 300 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CFAP57Q96MR6 1250 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TBCBQ99426 244 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SYT11Q9BT88 431 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SLC2A11Q9BYW1 496 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ANLNQ9NQW6 1124 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ABCB8Q9NUT2 735 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CACNA2D2Q9NY47 1150 aa14.61□□□□□ -0.07
HLA-DQB1-202ENST00000399079 APBB3O95704 486 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CCDC172P0C7W6 258 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ABCB4P21439 1286 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TACR2P21452 398 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 NTSR1P30989 418 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 GGCXP38435 758 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 LPAL2Q16609 132 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SLC25A52Q3SY17 297 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HSF5Q4G112 596 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 EOGTQ5NDL2 527 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ANO7Q6IWH7 933 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ANKS1BQ7Z6G8 1248 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 WDR5BQ86VZ2 330 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 CHSY1Q86X52 802 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ATP6V0D2Q8N8Y2 350 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MDGA1Q8NFP4 955 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 KCNV2Q8TDN2 545 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SORCS1Q8WY21 1168 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 DDX50Q9BQ39 737 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TPSD1Q9BZJ3 242 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 EPC1Q9H2F5 836 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SEMA4AQ9H3S1 761 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 HAUS4Q9H6D7 363 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 TAS2R14Q9NYV8 317 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ADAM22Q9P0K1 906 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 STAP1Q9ULZ2 295 aa14.6□□□□□ -0.07
HLA-DQB1-202ENST00000399079 EP300Q09472 2414 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 I6L893 689 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 AXIN1O15169 862 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ADCY5O95622 1261 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SLC2A3P11169 496 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SKILP12757 684 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 DGKEP52429 567 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 ASIC2Q16515 512 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RAB6CQ53S08 254 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 MPP7Q5T2T1 576 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 SFMBT2Q5VUG0 894 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 RNF43Q68DV7 783 aa14.59□□□□□ -0.07
HLA-DQB1-202ENST00000399079 PRR23BQ6ZRT6 265 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms