RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ACOX2Q99424 681 aa17.35■□□□□ 0.37
APTR-201ENST00000398043 NPY6RQ99463 290 aa17.35■□□□□ 0.37
APTR-201ENST00000398043 SMG5Q9UPR3 1016 aaKnown RBP17.35■□□□□ 0.37
APTR-201ENST00000398043 SPTBN4Q9H254 2564 aa17.35■□□□□ 0.37
APTR-201ENST00000398043 AXIN1O15169 862 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 UNGP13051 313 aaPredicted RBP17.34■□□□□ 0.37
APTR-201ENST00000398043 HLA-FP30511 346 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 NOS2P35228 1153 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 DGKEP52429 567 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 NR1I3Q14994 352 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
APTR-201ENST00000398043 C2CD6Q53TS8 623 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 EOGTQ5NDL2 527 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 NAA35Q5VZE5 725 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 TRNP1Q6NT89 227 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.34■□□□□ 0.37
APTR-201ENST00000398043 WFDC5Q8TCV5 224 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 GAB3Q8WWW8 586 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 CPA5Q8WXQ8 436 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 PRMT1Q99873 361 aaKnown RBP17.34■□□□□ 0.37
APTR-201ENST00000398043 GABRG3Q99928 467 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 SYT11Q9BT88 431 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 NUCKS1Q9H1E3 243 aaKnown RBP17.34■□□□□ 0.37
APTR-201ENST00000398043 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 TMEM59LQ9UK28 342 aa17.34■□□□□ 0.37
APTR-201ENST00000398043 A0A1W2PQC6 194 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 A0A1W2PQF6 199 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 TFE3P19532 575 aaPredicted RBP17.33■□□□□ 0.36
APTR-201ENST00000398043 MMP8P22894 467 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 NTSR1P30989 418 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 MATKP42679 507 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 CDK17Q00537 523 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 PTP4A2Q12974 167 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 MS4A13Q5J8X5 152 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 BNIPLQ7Z465 357 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 TSTD1Q8NFU3 115 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 BTN2A3PQ96KV6 586 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 PCMTD1Q96MG8 357 aaPredicted RBP17.33■□□□□ 0.36
APTR-201ENST00000398043 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 SYNCQ9H7C4 482 aa17.33■□□□□ 0.36
APTR-201ENST00000398043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.33■□□□□ 0.36
APTR-201ENST00000398043 CEP250Q9BV73 2442 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 DMXL1Q9Y485 3027 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 FAM170AA1A519 330 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 CAVIN2O95810 425 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 SIM2Q14190 667 aaPredicted RBP17.32■□□□□ 0.36
APTR-201ENST00000398043 TRIM72Q6ZMU5 477 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 ARCQ7LC44 396 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 TRMT11Q7Z4G4 463 aaKnown RBP17.32■□□□□ 0.36
APTR-201ENST00000398043 ANKS1BQ7Z6G8 1248 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 DCLK2Q8N568 766 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 RUBCNQ92622 972 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 PGAP3Q96FM1 320 aaPredicted RBP17.32■□□□□ 0.36
APTR-201ENST00000398043 DDIT4Q9NX09 232 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 THAP10Q9P2Z0 257 aaPredicted RBP17.32■□□□□ 0.36
APTR-201ENST00000398043 MYO6Q9UM54 1294 aa17.32■□□□□ 0.36
APTR-201ENST00000398043 I6L893 689 aaPredicted RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 TBL1XO60907 577 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 RPP40O75818 363 aaKnown RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 MOCS2O96007 188 aaPredicted RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 APOEP02649 317 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 TGM1P22735 817 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 FLT3P36888 993 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 PBX1P40424 430 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 GSCP56915 257 aaPredicted RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 RPS24P62847 133 aaKnown RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 CENPCQ03188 943 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 NUMA1Q14980 2115 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 EIF4HQ15056 248 aaKnown RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 ARTNQ5T4W7 220 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 KIAA1211LQ6NV74 962 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 ADIPOR2Q86V24 386 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 HJURPQ8NCD3 748 aaPredicted RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 SLC30A5Q8TAD4 765 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 FIBINQ8TAL6 211 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 ZC3H10Q96K80 434 aaKnown RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
APTR-201ENST00000398043 FAM204AQ9H8W3 233 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 ANLNQ9NQW6 1124 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 ELOVL2Q9NXB9 296 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 RRN3Q9NYV6 651 aa17.31■□□□□ 0.36
APTR-201ENST00000398043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.31■□□□□ 0.36
APTR-201ENST00000398043 WASH3PC4AMC7 463 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 M0QYT0 321 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 SLC2A3P11169 496 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 HOXB2P14652 356 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 TACR2P21452 398 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 CCR1P32246 355 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 GBP1P32455 592 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 WASP42768 502 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 CXCR3P49682 368 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 FANCCQ00597 558 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 ARID5AQ03989 594 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 LPAL2Q16609 132 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 CLEC16AQ2KHT3 1053 aa17.3■□□□□ 0.36
APTR-201ENST00000398043 FILIP1LQ4L180 1135 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms