RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 TMTC1Q8IUR5 882 aa26.3■■□□□ 1.8
TMEM55B-202ENST00000398020 DDI1Q8WTU0 396 aa26.3■■□□□ 1.8
TMEM55B-202ENST00000398020 ARHGEF38Q9NXL2 777 aa26.3■■□□□ 1.8
TMEM55B-202ENST00000398020 MIA3Q5JRA6 1907 aa26.3■■□□□ 1.8
TMEM55B-202ENST00000398020 PAGE1O75459 146 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 TARSP26639 723 aaKnown RBP26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 MRE11P49959 708 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 GALK1P51570 392 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 AMPD2Q01433 879 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 MESP2Q0VG99 397 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 MS4A13Q5J8X5 152 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 BRMS1LQ5PSV4 323 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 PIK3R6Q5UE93 754 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 CHSY1Q86X52 802 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 TMEM139Q8IV31 216 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 CCDC170Q8IYT3 715 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 MSANTD3Q96H12 275 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 P2RY13Q9BPV8 354 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 LTB4R2Q9NPC1 389 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 MARK1Q9P0L2 795 aa26.29■■□□□ 1.8
TMEM55B-202ENST00000398020 FAM170BA6NMN3 283 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 TRIM24O15164 1050 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 CYBBP04839 570 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 RAD9BQ6WBX8 426 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 BTBD6Q96KE9 485 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 PRICKLE1Q96MT3 831 aaPredicted RBP26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 SIK2Q9H0K1 926 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 PAXBP1Q9Y5B6 917 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 SNX10Q9Y5X0 201 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 GFRA2O00451 464 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 TACR2P21452 398 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 CYLC1P35663 651 aaPredicted RBP26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 SCYL2Q6P3W7 929 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 LGI2Q8N0V4 545 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 CD101Q93033 1021 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 TMA16Q96EY4 203 aaKnown RBP26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 CTTNBP2NLQ9P2B4 639 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 HS3ST4Q9Y661 456 aa26.28■■□□□ 1.8
TMEM55B-202ENST00000398020 PI15O43692 258 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 TULP3O75386 442 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 PENKP01210 267 aaPredicted RBP26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 TMEM253P0C7T8 217 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 KDSRQ06136 332 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 MPPE1Q53F39 396 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 ETFBKMTQ8IXQ9 262 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 CFAP52Q8N1V2 620 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 PJA1Q8NG27 643 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 PRMT1Q99873 361 aaKnown RBP26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 DDX50Q9BQ39 737 aaKnown RBP26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 DNAJC17Q9NVM6 304 aaKnown RBP26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 ANAPC7Q9UJX3 599 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 CLEC4EQ9ULY5 219 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 MRPS17Q9Y2R5 130 aaKnown RBP26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 ZDBF2Q9HCK1 2354 aa26.27■■□□□ 1.8
TMEM55B-202ENST00000398020 NDUFA10O95299 355 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 GSDMDP57764 484 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 RPS24P62847 133 aaKnown RBP26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 GSE1Q14687 1217 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 DAB2IPQ5VWQ8 1189 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 C1orf228Q6PIY5 440 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 CCDC185Q8N715 623 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 RBM12Q9NTZ6 932 aaKnown RBP26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 STIM2Q9P246 746 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 TFR2Q9UP52 801 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 SIT1Q9Y3P8 196 aa26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 EPN1Q9Y6I3 576 aaPredicted RBP26.26■■□□□ 1.79
TMEM55B-202ENST00000398020 CACNG3O60359 315 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 GPR37L1O60883 481 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 TBL1XO60907 577 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 LCA5LO95447 670 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 DCNP07585 359 aaKnown RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 HOXD9P28356 352 aaPredicted RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 MAGEA1P43355 309 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 TMEM196Q5HYL7 178 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 TMEM31Q5JXX7 168 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 FSTL4Q6MZW2 842 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 SFTPA1Q8IWL2 248 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 ZNF687Q8N1G0 1237 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 ZNF564Q8TBZ8 553 aaPredicted RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 FNIP1Q8TF40 1166 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 XPO6Q96QU8 1125 aaKnown RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 C1QTNF1Q9BXJ1 281 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 OSGEPQ9NPF4 335 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 VANGL2Q9ULK5 521 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 EIF3CLB5ME19 914 aaKnown RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 F5H5T6 163 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 DESP17661 470 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 AUHQ13825 339 aaKnown RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 SPA17Q15506 151 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 FBXL22Q6P050 247 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 BMP8AQ7Z5Y6 402 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 C14orf80Q86SX3 495 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 CCDC105Q8IYK2 499 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 FBXL6Q8N531 539 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 ARFGAP1Q8N6T3 406 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 EIF3CQ99613 913 aaKnown RBP26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 MAGEB5Q9BZ81 275 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 DEC1Q9P2X7 70 aa26.25■■□□□ 1.79
TMEM55B-202ENST00000398020 KIAA1549LQ6ZVL6 1849 aa26.24■■□□□ 1.79
TMEM55B-202ENST00000398020 EGFP01133 1207 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms