RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 CDRT15Q96T59 188 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 ERI2A8K979 691 aaKnown RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 PIGNO95427 931 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 HARS2P49590 506 aaKnown RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 NME5P56597 212 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 SNX32Q86XE0 403 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 UMODL1Q5DID0 1318 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 ADSSP30520 456 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 PEX5P50542 639 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 CDK7P50613 346 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 TTC33Q6PID6 262 aaPredicted RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 MFN1Q8IWA4 741 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 TDRD5Q8NAT2 981 aaKnown RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 LRRC15Q8TF66 581 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 DHX33Q9H6R0 707 aaKnown RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 RRN3Q9NYV6 651 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 GRHL1Q9NZI5 618 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 TRHDEQ9UKU6 1024 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 ERCC2P18074 760 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 PLOD1Q02809 727 aaPredicted RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 NEPROQ6NW34 567 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 FAM117BQ6P1L5 589 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 ATP6V0D2Q8N8Y2 350 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 USP13Q92995 863 aaPredicted RBP12.74□□□□□ -0.37
SOCS6-201ENST00000397942 FBXO32Q969P5 355 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 SENP8Q96LD8 212 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
SOCS6-201ENST00000397942 MYO7AQ13402 2215 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TOMM70O94826 608 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 MYO1DO94832 1006 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 CELF3Q5SZQ8 465 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PPP2R3CQ969Q6 453 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TLCD1Q96CP7 247 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 CDCA5Q96FF9 252 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 ZNF184Q99676 751 aaPredicted RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PCDHA2Q9Y5H9 948 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 MYL4P12829 197 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 MAP1SQ66K74 1059 aaPredicted RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 CPA4Q9UI42 421 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 SLIT3O75094 1523 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 GPR182O15218 404 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 ENDOD1O94919 500 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 ESRRBO95718 433 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 POMCP01189 267 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 ME2P23368 584 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 AKT1P31749 480 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 HDAC4P56524 1084 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 FASTKD3Q14CZ7 662 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PARP6Q2NL67 630 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TAF2Q6P1X5 1199 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 EFL1Q7Z2Z2 1120 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 VAT1Q99536 393 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 MYH2Q9UKX2 1941 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 C16orf96A6NNT2 1141 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 FKBP9O95302 570 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 SERPINF2P08697 491 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 RANBP1P43487 201 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 INPP1P49441 399 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TIGD7Q6NT04 549 aaPredicted RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 FKBP9P1Q75LS8 142 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PPP1R13LQ8WUF5 828 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 SLC17A7Q9P2U7 560 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 C2CD2Q9Y426 696 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TRUB2O95900 331 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 CCDC130P13994 396 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PGAM1P18669 254 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PSMB4P28070 264 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 GTF2A2P52657 109 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 CSE1LP55060 971 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 HADHBP55084 474 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 SLC25A3Q00325 362 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 ZNF786Q8N393 782 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 DCUN1D1Q96GG9 259 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 PLIN4Q96Q06 1357 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 POPDC2Q9HBU9 364 aa12.73□□□□□ -0.37
SOCS6-201ENST00000397942 TRMT6Q9UJA5 497 aaKnown RBP12.73□□□□□ -0.37
SOCS6-201ENST00000397942 VPS9D1Q9Y2B5 631 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms