RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 FBXL19Q6PCT2 694 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 SLC15A3Q8IY34 581 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 MARVELD2Q8N4S9 558 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 ANKRD36BP1Q96IX9 119 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 WWP1Q9H0M0 922 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 C1orf21Q9H246 121 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 ASNSD1Q9NWL6 643 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 LZTS1Q9Y250 596 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 TDRKHQ9Y2W6 561 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 SPIDRQ14159 915 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 KRT81Q14533 505 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 TARBP2Q15633 366 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 MYLK3Q32MK0 819 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PDCD4Q53EL6 469 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 TEX44Q53QW1 395 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 EFHC1Q5JVL4 640 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 MROH9Q5TGP6 573 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 TRMT10BQ6PF06 316 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PATL1Q86TB9 770 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 TMEM192Q8IY95 271 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 SHKBP1Q8TBC3 707 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 DQX1Q8TE96 717 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PYDC1Q8WXC3 89 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PIWIL1Q96J94 861 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 NRBP2Q9NSY0 501 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 PAK5Q9P286 719 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 SUN2Q9UH99 717 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 ADAMTS6Q9UKP5 1117 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 MAD1L1Q9Y6D9 718 aa16.46■□□□□ 0.23
CHMP1A-201ENST00000397901 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.22
CHMP1A-201ENST00000397901 PRR5-ARHGAP8B1AHC4 643 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 PEX10O60683 326 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 PEX2P28328 305 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 ARHGAP8P85298 464 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 TBCCQ15814 346 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 TRNP1Q6NT89 227 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 SCYL2Q6P3W7 929 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 CYP4V2Q6ZWL3 525 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 CRLF3Q8IUI8 442 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 NDUFAF2Q8N183 169 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 DDI1Q8WTU0 396 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 EBF4Q9BQW3 602 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 PNPLA8Q9NP80 782 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 SIRPGQ9P1W8 387 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 PPME1Q9Y570 386 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 B4GALT5O43286 388 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 CBFA2T3O75081 653 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 CSDE1O75534 798 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 ZBED1O96006 694 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 CXCL8P10145 99 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 STAT5BP51692 787 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 EFNA5P52803 228 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 TFDP2Q14188 446 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 HIC1Q14526 733 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 LGSNQ5TDP6 509 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 RNF111Q6ZNA4 994 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 RXFP2Q8WXD0 754 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 MCRS1Q96EZ8 462 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 GRIP2Q9C0E4 1043 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 Q9H521 79 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 HOXC10Q9NYD6 342 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 ZNF180Q9UJW8 692 aa16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 FAF1Q9UNN5 650 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 HBS1LQ9Y450 684 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-201ENST00000397901 SH3PXD2BA1X283 911 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 PRPSAP2O60256 369 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 MAFO75444 373 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 HMGCRP04035 888 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 GJB1P08034 283 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 PDGFRAP16234 1089 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 GPD1P21695 349 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 PCSK6P29122 969 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 SLC5A2P31639 672 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 SURF1Q15526 300 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 EEF1DP3Q658K8 133 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 UNC5AQ6ZN44 842 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 TMC7Q7Z402 723 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 CCDC33Q8N5R6 958 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 PLD5Q8N7P1 536 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 GSTCDQ8NEC7 633 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 RNF157Q96PX1 679 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 SIX4Q9UIU6 781 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 CASQ2O14958 399 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 APOEP02649 317 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 ZNF143P52747 638 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 OR6B2Q6IFH4 312 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms