RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PDIK1LQ8N165 341 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 C1orf127Q8N9H9 656 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 DDI1Q8WTU0 396 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 FAF2Q96CS3 445 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 VCPIP1Q96JH7 1222 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 PEBP4Q96S96 227 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 XYLT2Q9H1B5 865 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 Q9H521 79 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 RPF1Q9H9Y2 349 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 CYLDQ9NQC7 956 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 PLK2Q9NYY3 685 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SELENONQ9NZV5 590 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SCHIP1Q9P0W5 487 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 SLC17A6Q9P2U8 582 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 PSMC3IPQ9P2W1 217 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 HEY2Q9UBP5 337 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ZNHIT2Q9UHR6 403 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 STYXL1Q9Y6J8 313 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 GOLGA8TH3BQL2 631 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 MCF2LO15068 1137 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 PRPF4O43172 522 aaKnown RBP eCLIP5.18□□□□□ -1.583e-10■□□□□ 9.3
SSR1-202ENST00000397511 BUD23O43709 281 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 MAFO75444 373 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 USP1O94782 785 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 MICAL2O94851 1124 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ZBED1O96006 694 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SMIM18P0DKX4 95 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 TXNP10599 105 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 RARBP10826 455 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 BGNP21810 368 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 GRIA1P42261 906 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 RABGGTBP53611 331 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SLC18A1P54219 525 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ARL4CP56559 192 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ACTR3P61158 418 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 FAAP100Q0VG06 881 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 PTK7Q13308 1070 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 KRT81Q14533 505 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 MORF4L2Q15014 288 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 HADHQ16836 314 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 ZNF362Q5T0B9 420 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 UGT2A3Q6UWM9 527 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ZCCHC23Q6ZST2 131 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 GET4Q7L5D6 327 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 DHDDSQ86SQ9 333 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 TMPRSS6Q8IU80 811 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SULF1Q8IWU6 871 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 PPIL6Q8IXY8 311 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.18□□□□□ -1.58
SSR1-202ENST00000397511 ICA1LQ8NDH6 482 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ZFP28Q8NHY6 868 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 NDRG1Q92597 394 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 SERAC1Q96JX3 654 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SRPK1Q96SB4 655 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 TRIM55Q9BYV6 548 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 ELOVL4Q9GZR5 314 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SPATC1LQ9H0A9 340 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 TRPC7Q9HCX4 862 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 SIX4Q9UIU6 781 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 CPSF3Q9UKF6 684 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 MTO1Q9Y2Z2 717 aaKnown RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 TRIM17Q9Y577 477 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 GPC6Q9Y625 555 aaPredicted RBP5.18□□□□□ -1.58
SSR1-202ENST00000397511 AK5Q9Y6K8 562 aa5.18□□□□□ -1.58
SSR1-202ENST00000397511 NFASCO94856 1347 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 MGAMO43451 1857 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 FAM237BA0A1B0GVD1 139 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 TCRBV9S1A1TA0A576 114 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 C3orf70A6NLC5 250 aaPredicted RBP5.17□□□□□ -1.58
SSR1-202ENST00000397511 CXorf49A8MYA2 514 aaPredicted RBP5.17□□□□□ -1.58
SSR1-202ENST00000397511 EIF3FO00303 357 aaPredicted RBP5.17□□□□□ -1.58
SSR1-202ENST00000397511 SPTLC1O15269 473 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 ALOX15BO15296 676 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 SH3BP5O60239 455 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 DNAJC6O75061 913 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 DDNO94850 711 aaPredicted RBP5.17□□□□□ -1.58
SSR1-202ENST00000397511 MT-ND3P03897 115 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 HMGCRP04035 888 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 TFAP2AP05549 437 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 STAG3L1P0CL83 205 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 COL6A2P12110 1019 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 RBL1P28749 1068 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 PHBP35232 272 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 ZNF132P52740 706 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 NDST1P52848 882 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 ZNF280AP59817 542 aaPredicted RBP5.17□□□□□ -1.58
SSR1-202ENST00000397511 DPYSL3Q14195 570 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 CA9Q16790 459 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 CCDC142Q17RM4 750 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 ZNF423Q2M1K9 1284 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 MROH9Q5TGP6 573 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 FAM160B1Q5W0V3 765 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 TRNP1Q6NT89 227 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 CASC4Q6P4E1 433 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 BORAQ6PGQ7 559 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 CDHR3Q6ZTQ4 885 aa5.17□□□□□ -1.58
SSR1-202ENST00000397511 ACOT1Q86TX2 421 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms