RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF569Q5MCW4 686 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 RHOT1Q8IXI2 618 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 KIAA1958Q8N8K9 716 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 HSPH1Q92598 858 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 RPP25Q9BUL9 199 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 TBC1D14Q9P2M4 693 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 SNX10Q9Y5X0 201 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 HS3ST4Q9Y661 456 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 WNT6Q9Y6F9 365 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 GOLGA6L7A0A1B0GV03 622 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 SLC9A3R1O14745 358 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 KRT7P08729 469 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 RARAP10276 462 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 GRM2Q14416 872 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 MS4A13Q5J8X5 152 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 PIK3R6Q5UE93 754 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 NADSYN1Q6IA69 706 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 DEPDC1BQ8WUY9 529 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 TEKT4Q8WW24 435 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 RSAD2Q8WXG1 361 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 DDX50Q9BQ39 737 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 MAGEB5Q9BZ81 275 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 DHX35Q9H5Z1 703 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 DUS2Q9NX74 493 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 LOC730098B7Z3J9 87 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 PSTPIP1O43586 416 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 PSMC3P17980 439 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 GGCXP38435 758 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 IFNAR2P48551 515 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 ATP13A4Q4VNC1 1196 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 ZFYVE27Q5T4F4 411 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 ADGRF1Q5T601 910 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 LRRC38Q5VT99 294 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 RAP1GAP2Q684P5 730 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 POLNQ7Z5Q5 900 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 CHSY1Q86X52 802 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 PSTKQ8IV42 348 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 ADHFE1Q8IWW8 467 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 OSCP1Q8WVF1 389 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 CD101Q93033 1021 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 OSBPL2Q9H1P3 480 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 LINC00597Q9H2U6 94 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 PRKAG3Q9UGI9 489 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 STOML2Q9UJZ1 356 aa24.43■■□□□ 1.5
TSPAN4-203ENST00000397397 TACR2P21452 398 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 MLLT6P55198 1093 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 FCHO2Q0JRZ9 810 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 CA9Q16790 459 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 FAM133BQ5BKY9 247 aaKnown RBP24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 PYROXD2Q8N2H3 581 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 SLC35F6Q8N357 371 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 NXPE3Q969Y0 559 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 OTUB2Q96DC9 234 aa24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 PACSIN2Q9UNF0 486 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 KIF26AQ9ULI4 1882 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-203ENST00000397397 MSNP26038 577 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 CTNNA2P26232 953 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 SLC6A4P31645 630 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 ACBD5Q5T8D3 534 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 RFWD3Q6PCD5 774 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 FAM217AQ8IXS0 508 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 KRT35Q92764 455 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 ZFYVE19Q96K21 471 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 C1orf74Q96LT6 269 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 TRMT61BQ9BVS5 477 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 KCNK12Q9HB15 430 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 KLHL11Q9NVR0 708 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 IGSF9Q9P2J2 1179 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 OR12D3Q9UGF7 316 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 C5orf42Q9H799 3197 aa24.41■■□□□ 1.5
TSPAN4-203ENST00000397397 F5H5T6 163 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 TNFRSF10AO00220 468 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 TRDMT1O14717 391 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 TSPAN3O60637 253 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 GDI1P31150 447 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 CTNNA1P35221 906 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 CHKAP35790 457 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 MARCKSL1P49006 195 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 VCPP55072 806 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 GNG11P61952 73 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 ZP2Q05996 745 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 AUHQ13825 339 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 KRT81Q14533 505 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 MEI1Q5TIA1 1274 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 TRIM68Q6AZZ1 485 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 C14orf80Q86SX3 495 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 ZSCAN30Q86W11 494 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 LGI2Q8N0V4 545 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 CPXM2Q8N436 756 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 ASIC4Q96FT7 647 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 KCTD15Q96SI1 283 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 PRMT1Q99873 361 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 CD320Q9NPF0 282 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 DDX56Q9NY93 547 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 VANGL2Q9ULK5 521 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 PCDHA3Q9Y5H8 950 aa24.4■■□□□ 1.5
TSPAN4-203ENST00000397397 CCDC66A2RUB6 948 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 MIF4GDA9UHW6 222 aaKnown RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms