RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PLK2Q9NYY3 685 aa9.89□□□□□ -0.83
NEDD9-203ENST00000397378 SCML2Q9UQR0 700 aa9.89□□□□□ -0.83
NEDD9-203ENST00000397378 ZNF510Q9Y2H8 683 aa9.89□□□□□ -0.83
NEDD9-203ENST00000397378 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
NEDD9-203ENST00000397378 CLIC4Q9Y696 253 aa9.89□□□□□ -0.83
NEDD9-203ENST00000397378 FLNCQ14315 2725 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 DOPEY1Q5JWR5 2465 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 TGFB1I1O43294 461 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 TSPAN3O60637 253 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 STC2O76061 302 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 EPHX1P07099 455 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 FAM87AP0C7U9 286 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ITGB6P18564 788 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ACP1P24666 158 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 CHKAP35790 457 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 AFMP43652 599 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 DAB2P98082 770 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 BNIP3Q12983 259 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ZNF234Q14588 700 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 RABEP1Q15276 862 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 GEN1Q17RS7 908 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ZNF667Q5HYK9 610 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 C3orf38Q5JPI3 329 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 FYB2Q5VWT5 728 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 XKR5Q6UX68 686 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ANKS1BQ7Z6G8 1248 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ACOT1Q86TX2 421 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 CRYBG2Q8N1P7 616 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 XXYLT1Q8NBI6 393 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 RBBP8NLQ8NC74 664 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 CCDC127Q96BQ5 260 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 LIN37Q96GY3 246 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 PIWIL1Q96J94 861 aaKnown RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 GZF1Q9H116 711 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 PNPLA8Q9NP80 782 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 AASDHPPTQ9NRN7 309 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 AGPAT3Q9NRZ7 376 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 ELOVL2Q9NXB9 296 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
NEDD9-203ENST00000397378 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-203ENST00000397378 A0A087X0B3 334 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 FAM47DPA6NHR8 397 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 HHLA1C9JL84 531 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 TIMM44O43615 452 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 PHACTR2O75167 634 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 CSO75390 466 aaKnown RBP9.87□□□□□ -0.83
NEDD9-203ENST00000397378 KLKB1P03952 638 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 SFTPCP11686 197 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 RARGP13631 454 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 CCDC130P13994 396 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 PRKCHP24723 683 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 RBMS1P29558 406 aaKnown RBP9.87□□□□□ -0.83
NEDD9-203ENST00000397378 PSEN1P49768 467 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 AP3M2P53677 418 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 MAP3K7CLP57077 242 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 CAMK2GQ13555 558 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-203ENST00000397378 BMT2Q1RMZ1 405 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 ZNF699Q32M78 642 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 ARL13BQ3SXY8 428 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 SERPINA13PQ6UXR4 307 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 USP53Q70EK8 1073 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 FAM26EQ8N5C1 309 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 OR2T3Q8NH03 318 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 SLC2A14Q8TDB8 520 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 HPS3Q969F9 1004 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 CLIC6Q96NY7 704 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 CCNL2Q96S94 520 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-203ENST00000397378 ORAI3Q9BRQ5 295 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 SLC2A11Q9BYW1 496 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 DCLK3Q9C098 648 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 SDCBP2Q9H190 292 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 NMUR1Q9HB89 426 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 SATB2Q9UPW6 733 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 PCDHA5Q9Y5H7 936 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 BSNQ9UPA5 3926 aa9.87□□□□□ -0.83
NEDD9-203ENST00000397378 UBE4BO95155 1302 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 LRRK2Q5S007 2527 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 A0A1W2PQH9 124 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CLEC18AA5D8T8 446 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 MDM4O15151 490 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CLIC2O15247 247 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CYP26A1O43174 497 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 PPFIA2O75334 1257 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 DNTTP04053 509 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 WNT1P04628 370 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 FAM200BP0CF97 657 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CD38P28907 300 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CYP2J2P51589 502 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 INHBCP55103 352 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CLDN10P78369 228 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 COG7P83436 770 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 ARID5AQ03989 594 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 C10orf120Q5SQS8 335 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 SFMBT2Q5VUG0 894 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 KIAA0895LQ68EN5 471 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CLEC18BQ6UXF7 455 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms