RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DHX58Q96C10 678 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 DUSP16Q9BY84 665 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 MARCH2Q9P0N8 246 aa15.65■□□□□ 0.1
SEC13-206ENST00000397102 A0A1W2PPC4 97 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 SLC12A8A0AV02 714 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 YKT6O15498 198 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 KIF20AO95235 890 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 ITGAVP06756 1048 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 ABCB4P21439 1286 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 DLG4P78352 724 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 CFHR1Q03591 330 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 ZNF776Q68DI1 518 aaPredicted RBP15.64■□□□□ 0.09
SEC13-206ENST00000397102 SV2AQ7L0J3 742 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 CHST9Q7L1S5 443 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 RSRC2Q7L4I2 434 aaKnown RBP15.64■□□□□ 0.09
SEC13-206ENST00000397102 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.64■□□□□ 0.09
SEC13-206ENST00000397102 SAP25Q8TEE9 199 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 SLC6A18Q96N87 628 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 SLC39A2Q9NP94 309 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 NCKAP1Q9Y2A7 1128 aa15.64■□□□□ 0.09
SEC13-206ENST00000397102 KALRNO60229 2985 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 ZNF462Q96JM2 2506 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 J3QKU1 62 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 PIK3CAP42336 1068 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 NASPP49321 788 aaPredicted RBP15.63■□□□□ 0.09
SEC13-206ENST00000397102 ZNF445P59923 1031 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 SHBQ15464 509 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 TRIP4Q15650 581 aaPredicted RBP15.63■□□□□ 0.09
SEC13-206ENST00000397102 PRAMEF14Q5SWL7 426 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 USP30Q70CQ3 517 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 KIAA0907Q7Z7F0 614 aaPredicted RBP15.63■□□□□ 0.09
SEC13-206ENST00000397102 ADIPOR2Q86V24 386 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 SLC9A9Q8IVB4 645 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 AHI1Q8N157 1196 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 IQUBQ8NA54 791 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 TSC1Q92574 1164 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 FGF11Q92914 225 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 ARID3AQ99856 593 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 BACH2Q9BYV9 841 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 DNAI2Q9GZS0 605 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 MAGEF1Q9HAY2 307 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 CYP3A43Q9HB55 503 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 ABCB8Q9NUT2 735 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 DMAC2Q9NW81 257 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 SCML1Q9UN30 329 aa15.63■□□□□ 0.09
SEC13-206ENST00000397102 PVALEFA0A1B0GWK0 134 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 HLA-DRAP01903 254 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 WNT1P04628 370 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 ATP5BP06576 529 aaKnown RBP15.62■□□□□ 0.09
SEC13-206ENST00000397102 DLDP09622 509 aaKnown RBP15.62■□□□□ 0.09
SEC13-206ENST00000397102 PABPC1P11940 636 aaKnown RBP15.62■□□□□ 0.09
SEC13-206ENST00000397102 YWHAGP61981 247 aaKnown RBP eCLIP15.62■□□□□ 0.09
SEC13-206ENST00000397102 PPP1R26Q5T8A7 1209 aaPredicted RBP15.62■□□□□ 0.09
SEC13-206ENST00000397102 MBLAC2Q68D91 279 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 PCSK4Q6UW60 755 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 CACTIN-AS1Q8N1I8 211 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 EID2Q8N6I1 236 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 TMC2Q8TDI7 906 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 TMEM174Q8WUU8 243 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 TMEM176AQ96HP8 235 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 IMPG2Q9BZV3 1241 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 PABPC3Q9H361 631 aaKnown RBP15.62■□□□□ 0.09
SEC13-206ENST00000397102 GGA2Q9UJY4 613 aa15.62■□□□□ 0.09
SEC13-206ENST00000397102 FAM47DPA6NHR8 397 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 ERVH48-1M5A8F1 160 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 IKBKBO14920 756 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 BRINP1O60477 761 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 SYT1P21579 422 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 CD38P28907 300 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 EPHA8P29322 1005 aaPredicted RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 CASP1P29466 404 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 ACTN2P35609 894 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 HARS2P49590 506 aaKnown RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 GALCP54803 685 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 TLE3Q04726 772 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 SFSWAPQ12872 951 aaKnown RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 ILKQ13418 452 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 CUL4AQ13619 759 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 STK38Q15208 465 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 RAB41Q5JT25 222 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 ZC3H3Q8IXZ2 948 aaKnown RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 LINC00301Q8NCQ3 95 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 UBXN6Q9BZV1 441 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 RSPH9Q9H1X1 276 aaPredicted RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 BLZF1Q9H2G9 400 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 EBF2Q9HAK2 575 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 APOBEC3GQ9HC16 384 aaKnown RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 GDF3Q9NR23 364 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 AASDHPPTQ9NRN7 309 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 OLA1Q9NTK5 396 aaKnown RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 STOML2Q9UJZ1 356 aa15.61■□□□□ 0.09
SEC13-206ENST00000397102 NYNRINQ9P2P1 1898 aaKnown RBP15.61■□□□□ 0.09
SEC13-206ENST00000397102 A0A1W2PR77 199 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 PPP6R2O75170 966 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 LATS1O95835 1130 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 CD58P19256 250 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 ARRB1P49407 418 aaPredicted RBP15.6■□□□□ 0.09
SEC13-206ENST00000397102 CXADRP78310 365 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 TBC1D25Q3MII6 688 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms