RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 GNAZP19086 355 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 AVPR1AP37288 418 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 VHLP40337 213 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 MRPS5P82675 430 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 STX3Q13277 289 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 ITGA9Q13797 1035 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 FASTKD1Q53R41 847 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 ZNF618Q5T7W0 954 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 N4BP2L1Q5TBK1 243 aaPredicted RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 FAM43BQ6ZT52 329 aaPredicted RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 DCLK2Q8N568 766 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 DNAAF3Q8N9W5 541 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 SHCBP1Q8NEM2 672 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 MAML3Q96JK9 1138 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 MRPL45Q9BRJ2 306 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 TUT1Q9H6E5 874 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 SPATS2LQ9NUQ6 558 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 TUBGCP4Q9UGJ1 667 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 DRG1Q9Y295 367 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 MYOCOSA0A1B0GUC4 107 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 SPECC1L-ADORA2AF8WAN1 911 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 DCXO43602 365 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 LSM8O95777 96 aaKnown RBP9.58□□□□□ -0.88
NDE1-201ENST00000396354 MMP3P08254 477 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 MGAT1P26572 445 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 SERPINB5P36952 375 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 CACNA2D1P54289 1103 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 CUL3Q13618 768 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 GRIK4Q16099 956 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 USP33Q8TEY7 942 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 TMEM40Q8WWA1 233 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 SLC44A1Q8WWI5 657 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 RSAD1Q9HA92 442 aa9.58□□□□□ -0.88
NDE1-201ENST00000396354 A0A1B0GVG6 124 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 ASB14A6NK59 587 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 A8MXQ7 604 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 TPP1O14773 563 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 AIM2O14862 343 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 SKIP12755 728 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 ATP6V1C1P21283 382 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 CYP2F1P24903 491 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 BTKQ06187 659 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 FAM187BQ17R55 369 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 C6orf163Q5TEZ5 329 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 TTC39BQ5VTQ0 682 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 HEATR6Q6AI08 1181 aaKnown RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 CEP128Q6ZU80 1094 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 CAND1Q86VP6 1230 aaKnown RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 SH3TC2Q8TF17 1288 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 INPP5DQ92835 1189 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 NFKBIZQ9BYH8 718 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 PRMT7Q9NVM4 692 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 SCOCQ9UIL1 159 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 NELFEP18615 380 aaKnown RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 TYK2P29597 1187 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 GPD2P43304 727 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 SLC26A2P50443 739 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 AP3M2P53677 418 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 FKBP1BP68106 108 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 SLC10A2Q12908 348 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 LAMC2Q13753 1193 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 TMEM132DQ14C87 1099 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 PRKD1Q15139 912 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 PARP6Q2NL67 630 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 DCAF6Q58WW2 860 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 ZNF484Q5JVG2 852 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 RABGAP1LQ5R372 815 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 SCUBE1Q8IWY4 988 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 CCDC185Q8N715 623 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 PQLC3Q8N755 202 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 MAB21L3Q8N8X9 362 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 USP13Q92995 863 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 RNF157Q96PX1 679 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 SLC7A8Q9UHI5 535 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 PPME1Q9Y570 386 aa9.57□□□□□ -0.88
NDE1-201ENST00000396354 TIMM13Q9Y5L4 95 aaPredicted RBP9.57□□□□□ -0.88
NDE1-201ENST00000396354 ANKRD12Q6UB98 2062 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 CLDN5O00501 218 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 KRT38O76015 456 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ZNF157P51786 506 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 SLC34A1Q06495 639 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 CCDC14Q49A88 953 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 RAPH1Q70E73 1250 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 HPS6Q86YV9 775 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 MAP7D3Q8IWC1 876 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ULK2Q8IYT8 1036 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ZNF784Q8NCA9 323 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 PPP4R1Q8TF05 950 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 FAM136AQ96C01 138 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 GBP5Q96PP8 586 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PANX3Q96QZ0 392 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ADAMTS10Q9H324 1103 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 XAB2Q9HCS7 855 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 NDE1Q9NXR1 346 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SNTG2Q9NY99 539 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 HESX1Q9UBX0 185 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 MTO1Q9Y2Z2 717 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 TEX264Q9Y6I9 313 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms