RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 FAM111AQ96PZ2 611 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 RTP3Q9BQQ7 232 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 GIT1Q9Y2X7 761 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 PRG3Q9Y2Y8 225 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-204ENST00000395756 TMEM88BA6NKF7 163 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 H3BRJ5 948 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 KIF3CO14782 793 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 LPXNO60711 386 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 LTFP02788 710 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 RWDD4Q6NW29 188 aaKnown RBP18.45■□□□□ 0.54
SREBF1-204ENST00000395756 OR10T2Q8NGX3 314 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 APOL2Q9BQE5 337 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 TKTL2Q9H0I9 626 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 UBP1Q9NZI7 540 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 SMG5Q9UPR3 1016 aaKnown RBP18.45■□□□□ 0.54
SREBF1-204ENST00000395756 USP3Q9Y6I4 520 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 CCDC78A2IDD5 438 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 NR2C2P49116 596 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 TPI1P60174 286 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 SCN4BQ8IWT1 228 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 QKIQ96PU8 341 aaKnown RBP eCLIP18.44■□□□□ 0.54
SREBF1-204ENST00000395756 WDCPQ9H6R7 721 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 PLAC1Q9HBJ0 212 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 CHST12Q9NRB3 414 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 DCTN4Q9UJW0 460 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-204ENST00000395756 SKAP2O75563 359 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-204ENST00000395756 MGAT3Q09327 533 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 ARMC3Q5W041 872 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 ZNF534Q76KX8 674 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 LRRC6Q86X45 466 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 ZNF280BQ86YH2 543 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 E2F8A0AVK6 867 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 GCATO75600 419 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 TOP3BO95985 862 aaKnown RBP18.44■□□□□ 0.54
SREBF1-204ENST00000395756 PCSK1P29120 753 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 EPHB2P29323 1055 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 PGFP49763 221 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 METTL23Q86XA0 190 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 KCTD13Q8WZ19 329 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 RTP4Q96DX8 246 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 KLHL14Q9P2G3 628 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 KLHL8Q9P2G9 620 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-204ENST00000395756 CDH9Q9ULB4 789 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 TLL2Q9Y6L7 1015 aa18.44■□□□□ 0.54
SREBF1-204ENST00000395756 A0A0U1RQF3 1178 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 IQANK1A0A1B0GTG1 560 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 PRPF4O43172 522 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■■□ 19.3
SREBF1-204ENST00000395756 ODC1P11926 461 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 ITIH4Q14624 930 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 OVOS1Q6IE37 1185 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 TBC1D1Q86TI0 1168 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-204ENST00000395756 TMEM86AQ8N2M4 240 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 FITM2Q8N6M3 262 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 USP33Q8TEY7 942 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 SLC44A1Q8WWI5 657 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 SMARCD1Q96GM5 515 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 COLEC11Q9BWP8 271 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 CYLDQ9NQC7 956 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 SFMBT1Q9UHJ3 866 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 CSH1P0DML2 217 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 CSH2P0DML3 217 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 MGAT1P26572 445 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 GRIK1P39086 918 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 MGAT5Q09328 741 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 SMYD5Q6GMV2 418 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 KIF2BQ8N4N8 673 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 GPR152Q8TDT2 470 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 SIGLEC10Q96LC7 697 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 WDR6Q9NNW5 1121 aaKnown RBP18.43■□□□□ 0.54
SREBF1-204ENST00000395756 SENP1Q9P0U3 644 aa18.43■□□□□ 0.54
SREBF1-204ENST00000395756 A0A0A0MRY4 1105 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 SMAPO00193 183 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 B4GALT3O60512 393 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 TRPA1O75762 1119 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 DGKIO75912 1065 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 FSBPO95073 299 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 CDHR3Q6ZTQ4 885 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 CEP57Q86XR8 500 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 ZNF567Q8N184 647 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 NPWQ8N729 165 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 MZB1Q8WU39 189 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 ZNF75CPQ92670 426 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-204ENST00000395756 SPATA13Q96N96 652 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 NPHS2Q9NP85 383 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 OR12D3Q9UGF7 316 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 MSI1O43347 362 aaKnown RBP18.42■□□□□ 0.54
SREBF1-204ENST00000395756 MOCS2O96007 188 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-204ENST00000395756 PPP2R5DQ14738 602 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 MTFR1Q15390 333 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 ARCQ7LC44 396 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 SLC26A11Q86WA9 606 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 PTPRN2Q92932 1015 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 NT5C3BQ969T7 300 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 ATXN7L3BQ96GX2 97 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 SLC2A13Q96QE2 648 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 IQCGQ9H095 443 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms