RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 PROX1Q92786 737 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 CELF6Q96J87 481 aaKnown RBP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 NSMCE2Q96MF7 247 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 BDH2Q9BUT1 245 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 CAB39LQ9H9S4 337 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 WHRNQ9P202 907 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 NDUFAF1Q9Y375 327 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 MAGI2Q86UL8 1455 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 A0A0G2JLW4 131 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 RAD51BO15315 384 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 TM9SF1O15321 606 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 HBP1O60381 514 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 RBP1P09455 135 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 ZNF543Q08ER8 600 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 RNASE12Q5GAN4 147 aaKnown RBP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 SPANXN2Q5MJ10 180 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 NOL9Q5SY16 702 aaKnown RBP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 ESRP1Q6NXG1 681 aaKnown RBP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 MZT2BQ6NZ67 158 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 SMIM5Q71RC9 77 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 STK32CQ86UX6 486 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 SLC20A1Q8WUM9 679 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 RMND5BQ96G75 393 aaPredicted RBP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 EPB41L1Q9H4G0 881 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 CROTQ9UKG9 612 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 PLA2G4CQ9UP65 541 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 RBM7Q9Y580 266 aaKnown RBP5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 FLT1P17948 1338 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 IGSF1Q8N6C5 1336 aa5.81□□□□□ -1.48
GAPVD1-206ENST00000394104 SHANK2Q9UPX8 1470 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 SAMD9Q5K651 1589 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 LAMC1P11047 1609 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CCDC182A6NF36 153 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 E7ENQ6 273 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 ERN1O75460 977 aaKnown RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 GYPCP04921 128 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 PON1P27169 355 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 RCVRNP35243 200 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CEBPGP53567 150 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 DGCR6Q14129 220 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 FNDC3BQ53EP0 1204 aaKnown RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 PRMT9Q6P2P2 845 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CLEC4GQ6UXB4 293 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 RNF180Q86T96 592 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 APLFQ8IW19 511 aaPredicted RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CYP4X1Q8N118 509 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 RNF148Q8N7C7 305 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 EEF1AKMT1Q8WVE0 214 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TRAPPC9Q96Q05 1148 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 ZSWIM1Q9BR11 485 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 IGFLR1Q9H665 355 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 LRRC4BQ9NT99 713 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 NDUFA13Q9P0J0 144 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 NARFQ9UHQ1 456 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 SNX6Q9UNH7 406 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 INVSQ9Y283 1065 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TPRKBQ9Y3C4 175 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 GPR182O15218 404 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TRIM3O75382 744 aaPredicted RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 PRG2P13727 222 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CYP2F1P24903 491 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 FMO4P31512 558 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CRATP43155 626 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 NT5C2P49902 561 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 RCAN1P53805 252 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 PRKAG1P54619 331 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 ITGA1P56199 1179 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 NRF1Q16656 503 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 PACS1Q6VY07 963 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 ATG14Q6ZNE5 492 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 GLT6D1Q7Z4J2 308 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CNPY4Q8N129 248 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 KYQ8NBH2 561 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 ITFG1Q8TB96 612 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 WDR60Q8WVS4 1066 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 COL26A1Q96A83 441 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TMEM169Q96HH4 297 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 EPB41L4BQ9H329 900 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TBC1D13Q9NVG8 400 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 MCUBQ9NWR8 336 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 MTMR4Q9NYA4 1195 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 COPG2Q9UBF2 871 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TMEM2Q9UHN6 1383 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 MRPS7Q9Y2R9 242 aaKnown RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TBX3O15119 743 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CLOCKO15516 846 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 B3GAT3O94766 335 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 UBOX5O94941 541 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 NDUFB10O96000 172 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 FAM86B2P0C5J1 330 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 STAG3L1P0CL83 205 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 TYMPP19971 482 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 EIF2S3P41091 472 aaKnown RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 POLD2P49005 469 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 GPR15P49685 360 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 ADARP55265 1226 aaKnown RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 MAD2L1Q13257 205 aaPredicted RBP5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 PDK2Q15119 407 aa5.8□□□□□ -1.48
GAPVD1-206ENST00000394104 CCDC153Q494R4 210 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms