RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DIP2AQ14689 1571 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 GPR182O15218 404 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 SERPINF2P08697 491 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
LCA5-202ENST00000392959 C16orf72Q14CZ0 275 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 ZNF470Q6ECI4 717 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 CLVS1Q8IUQ0 354 aaPredicted RBP13.43□□□□□ -0.26
LCA5-202ENST00000392959 ZCCHC7Q8N3Z6 543 aaKnown RBP13.43□□□□□ -0.26
LCA5-202ENST00000392959 B3GALNT2Q8NCR0 500 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 BAP1Q92560 729 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 COLEC11Q9BWP8 271 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 RRN3Q9NYV6 651 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
LCA5-202ENST00000392959 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 STK25O00506 426 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 PSMB9P28065 219 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 GPC1P35052 558 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 CASP5P51878 434 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 SAMD4BQ5PRF9 694 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 ANKS6Q68DC2 871 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 CYP2R1Q6VVX0 501 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 BNIPLQ7Z465 357 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 PRELID2Q8N945 189 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 PIWIL2Q8TC59 973 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 SLC25A23Q9BV35 468 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 MROH8Q9H579 483 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 RERGLQ9H628 205 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 CCDC167Q9P0B6 97 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 MICAL2O94851 1124 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 DPEP1P16444 411 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 THPOP40225 353 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 RENBPP51606 427 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 XRCC4Q13426 336 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 C1orf186Q6ZWK4 172 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 TMC7Q7Z402 723 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ACOX2Q99424 681 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 FAM192AQ9GZU8 254 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 H3BRB1 525 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ACKR2O00590 384 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ENDOD1O94919 500 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 KRT6AP02538 564 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 KRT6BP04259 564 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 KRT6CP48668 564 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 NUMBP49757 651 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ANXA11P50995 505 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 ARMCX4Q5H9R4 360 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ARHGAP17Q68EM7 881 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 FBXO39Q8N4B4 442 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 DNERQ8NFT8 737 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 EDEM1Q92611 657 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 GLT1D1Q96MS3 346 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 SYT15Q9BQS2 421 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 DPY30Q9C005 99 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 SLC7A5P2Q9GIP4 190 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 TUT1Q9H6E5 874 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 C1orf232A0A0U1RR37 186 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 IFNA14P01570 189 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 NUDT17P0C025 328 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 INSRRP14616 1297 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 KDELR1P24390 212 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 HNRNPH3P31942 346 aaKnown RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 NCKAP1LP55160 1127 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ADIGQ0VDE8 80 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 NCF4Q15080 339 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 TRIP4Q15650 581 aaPredicted RBP13.42□□□□□ -0.26
LCA5-202ENST00000392959 STK32CQ86UX6 486 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 OSMRQ99650 979 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 TBC1D10AQ9BXI6 508 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 ADGRE3Q9BY15 652 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 BTBD7Q9P203 1132 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
LCA5-202ENST00000392959 TISP43B9A030 160 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ZNF862O60290 1169 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 HMGCRP04035 888 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 HSMCR30P0CW71 290 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 SLC2A4P14672 509 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 SCNN1BP51168 640 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 C16orf46Q6P387 395 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 FAM126BQ8IXS8 530 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 MAGED4Q96JG8 741 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ZBTB45Q96K62 511 aaPredicted RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 APBA2Q99767 749 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 GNG14A0A1W2PPG7 69 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 HACD1B0YJ81 288 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 TMEM114B3SHH9 223 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ANKRD63C9JTQ0 380 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 PIGNO95427 931 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 NAB1Q13506 487 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 RNF43Q68DV7 783 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms