RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 APOEP02649 317 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 APOC2P02655 101 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 P4HBP07237 508 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 HNRNPCP07910 306 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 INHBAP08476 426 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SBK3P0C264 359 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GSTT2P0CG29 244 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GSTT2BP0CG30 244 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SRGAP2CP0DJJ0 459 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SRGAP2BP0DMP2 458 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ATP6V1B1P15313 513 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ZFXP17010 805 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF12P17014 697 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ATF7P17544 494 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PTPN2P17706 415 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ITGB5P18084 799 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GARTP22102 1010 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 KDELR1P24390 212 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 DCKP27707 260 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PIK3R1P27986 724 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MLH1P40692 756 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GRIA3P42263 894 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NSFP46459 744 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NPTX2P47972 431 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 HSPA13P48723 471 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 HSD17B4P51659 736 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PSMD7P51665 324 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PEX3P56589 373 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 RPL10AP62906 217 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 IRX4P78413 519 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MRPS22P82650 360 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GRSF1Q12849 480 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TMED1Q13445 227 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MTM1Q13496 603 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CUL2Q13617 745 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 BMPR2Q13873 1038 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PDE1CQ14123 709 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 DPYSL3Q14195 570 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TAF5Q15542 800 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CLPPQ16740 277 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PTPN20Q4JDL3 420 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CEP55Q53EZ4 464 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SLC44A4Q53GD3 710 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FASTKD1Q53R41 847 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 AARS2Q5JTZ9 985 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FAM182AQ5T1J6 154 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TREML2Q5T2D2 321 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 VWA5B1Q5TIE3 1220 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 LIN9Q5TKA1 542 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 KAZNQ674X7 775 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PDPK2PQ6A1A2 396 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ANKRD26P1Q6NSI1 321 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NEPROQ6NW34 567 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ZFP1Q6P2D0 407 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 RSBN1LQ6PCB5 846 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SLC2A7Q6PXP3 512 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NAPRTQ6XQN6 538 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GADL1Q6ZQY3 521 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CYS1Q717R9 158 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NIPA1Q7RTP0 329 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CLEC14AQ86T13 490 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CRLF3Q8IUI8 442 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 EPHX4Q8IUS5 362 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NUDCD3Q8IVD9 361 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 C4orf19Q8IY42 314 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 RNF168Q8IYW5 571 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PGAM4Q8N0Y7 254 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PDIK1LQ8N165 341 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CENPSQ8N2Z9 138 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MPP5Q8N3R9 675 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM151AQ8N4L1 468 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CPSF7Q8N684 471 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PQLC3Q8N755 202 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PPM1NQ8N819 430 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MFSD2AQ8NA29 543 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PCYOX1LQ8NBM8 494 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SLC4A11Q8NBS3 891 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CATSPER1Q8NEC5 780 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CEP70Q8NHQ1 597 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 JOSD2Q8TAC2 188 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PIWIL2Q8TC59 973 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ACMSDQ8TDX5 336 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GIPC3Q8TF64 312 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 JDP2Q8WYK2 163 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TFAP2BQ92481 460 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 DLG3Q92796 817 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ABTB1Q969K4 478 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 C12orf43Q96C57 262 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ISOC1Q96CN7 298 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FAF2Q96CS3 445 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CCDC124Q96CT7 223 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 COX4I2Q96KJ9 171 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SNX27Q96L92 541 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MCEEQ96PE7 176 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 OR52B2Q96RD2 323 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 KCNK16Q96T55 309 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PRPF18Q99633 342 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SLC29A1Q99808 456 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SENP7Q9BQF6 1050 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MXRA8Q9BRK3 442 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms