RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ADARP55265 1226 aaKnown RBP18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 GK3PQ14409 553 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 GRM2Q14416 872 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 ANKRD20A4Q4UJ75 823 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 FAM102AQ5T9C2 384 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 TAPT1Q6NXT6 567 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 IYDQ6PHW0 289 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 B3GNT6Q6ZMB0 384 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PDIK1LQ8N165 341 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 CFAP36Q96G28 342 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 OSBPP22059 807 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PCSK6P29122 969 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 RGS7P49802 495 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 NDST1P52848 882 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PPIL2Q13356 520 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 TLR1Q15399 786 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 RFX6Q8HWS3 928 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 NUDCD3Q8IVD9 361 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 MAP7D3Q8IWC1 876 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 NAT8LQ8N9F0 302 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 FAM71DQ8N9W8 422 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PIP4K2CQ8TBX8 421 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 NLRP7Q8WX94 980 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PRICKLE1Q96MT3 831 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 ZDHHC7Q9NXF8 308 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PTTG2Q9NZH5 202 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PCDHGA4Q9Y5G9 962 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 PMLP29590 882 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 MAMDC4Q6UXC1 1216 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 HPS6Q86YV9 775 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 ICA1LQ8NDH6 482 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 RSAD2Q8WXG1 361 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 LZTS1Q9Y250 596 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 INPP5FQ9Y2H2 1132 aa18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 TDRKHQ9Y2W6 561 aaKnown RBP18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 HEMK1Q9Y5R4 338 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-202ENST00000389805 MAP3K6O95382 1288 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 CDK4P11802 303 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 HADHQ16836 314 aaKnown RBP18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 C1orf228Q6PIY5 440 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 SH2D5Q6ZV89 423 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 POLNQ7Z5Q5 900 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 RSPH3Q86UC2 560 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 CRLF3Q8IUI8 442 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 ZFP28Q8NHY6 868 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 LPIN3Q9BQK8 851 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 MROH8Q9H579 483 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 USP18Q9UMW8 372 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 ATP9BO43861 1147 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 KRT7P08729 469 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 PTPN7P35236 360 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 COG7P83436 770 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 SLC18A2Q05940 514 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 FAM91A1Q658Y4 838 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 TMC7Q7Z402 723 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 ADPGKQ9BRR6 497 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 UBAP1Q9NZ09 502 aa18.23■□□□□ 0.51
SQSTM1-202ENST00000389805 LYPLA1O75608 230 aaPredicted RBP18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 ADORA2AP29274 412 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 TMEM132DQ14C87 1099 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 CNBD2Q96M20 576 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 PPEF2O14830 753 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 UGT1A9O60656 530 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 TBL3Q12788 808 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 MYLK3Q32MK0 819 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 OR6B2Q6IFH4 312 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 AAGABQ6PD74 315 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 KYAT3Q6YP21 454 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 BBS12Q6ZW61 710 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 UGT1A7Q9HAW7 530 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 UGT1A10Q9HAW8 530 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 UGT1A8Q9HAW9 530 aa18.22■□□□□ 0.51
SQSTM1-202ENST00000389805 SUPT3HO75486 399 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 TRUB2O95900 331 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 MCF2P10911 925 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 RPL5P46777 297 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 SH3BGRP55822 239 aaPredicted RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 ACAP1Q15027 740 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 FASTKD5Q7L8L6 764 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 SLC44A1Q8WWI5 657 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 HSPBAP1Q96EW2 488 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 GPATCH2LQ9NWQ4 482 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 DPP3Q9NY33 737 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 TSPAN16Q9UKR8 245 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 HES2Q9Y543 173 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 CXorf49A8MYA2 514 aaPredicted RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 EIF3EP60228 445 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 MRPS5P82675 430 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 KIZQ2M2Z5 673 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 KLC3Q6P597 504 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 RXFP2Q8WXD0 754 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 MCRS1Q96EZ8 462 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 ZNF408Q9H9D4 720 aa18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 HBS1LQ9Y450 684 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-202ENST00000389805 DTNAQ9Y4J8 743 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms