RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 GZF1Q9H116 711 aaPredicted RBP10.09□□□□□ -0.79
IFT88-203ENST00000389373 NEUROG2Q9H2A3 272 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 TMEM245Q9H330 911 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 STRIP2Q9ULQ0 834 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 PCDHA5Q9Y5H7 936 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 CLIC4Q9Y696 253 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 NUMA1Q14980 2115 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 LRRC72A6NJI9 287 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 TLR4O00206 839 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 RNASEH1O60930 286 aaKnown RBP10.08□□□□□ -0.8
IFT88-203ENST00000389373 SDC3O75056 442 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 USP12O75317 370 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 RNASEH2AO75792 299 aaKnown RBP10.08□□□□□ -0.8
IFT88-203ENST00000389373 P4HA1P13674 534 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 POLR2EP19388 210 aaKnown RBP10.08□□□□□ -0.8
IFT88-203ENST00000389373 HLA-FP30511 346 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 HOXD13P35453 343 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 PSEN1P49768 467 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 CSRP3P50461 194 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 E2F1Q01094 437 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 NFATC3Q12968 1075 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 NCOA4Q13772 614 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 BMT2Q1RMZ1 405 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 MBLAC2Q68D91 279 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 CCDC73Q6ZRK6 1079 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 CRYBG2Q8N1P7 616 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 CPXM2Q8N436 756 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 DCBLD1Q8N8Z6 715 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 WFIKKN2Q8TEU8 576 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 GOLGA1Q92805 767 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 TMA16Q96EY4 203 aaKnown RBP10.08□□□□□ -0.8
IFT88-203ENST00000389373 MED8Q96G25 268 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 OMDQ99983 421 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 FAM117AQ9C073 453 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 OSBPL2Q9H1P3 480 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 PABPC3Q9H361 631 aaKnown RBP10.08□□□□□ -0.8
IFT88-203ENST00000389373 FBRSQ9HAH7 460 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 AGPAT3Q9NRZ7 376 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 SERGEFQ9UGK8 458 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 IL17BQ9UHF5 180 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 GGA2Q9UJY4 613 aa10.08□□□□□ -0.8
IFT88-203ENST00000389373 MYLKQ15746 1914 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 CABIN1Q9Y6J0 2220 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 ZNF462Q96JM2 2506 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 A0A1W2PR77 199 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 MID1O15344 667 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 TGFB1I1O43294 461 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 STX6O43752 255 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 EXOC3O60645 756 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 EIF5BO60841 1220 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 ATP5BP06576 529 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 PABPC1P11940 636 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 ACP1P24666 158 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 HOXD9P28356 352 aaPredicted RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 KIF11P52732 1056 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 NXPH1P58417 271 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 ST8SIA6P61647 398 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 CEBPZQ03701 1054 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 SRSF1Q07955 248 aaKnown RBP eCLIP10.07□□□□□ -0.8
IFT88-203ENST00000389373 EHHADHQ08426 723 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 SFSWAPQ12872 951 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 HS1BP3Q53T59 392 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 SPOPLQ6IQ16 392 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 TMC6Q7Z403 805 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 ADIPOR2Q86V24 386 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 MMAAQ8IVH4 418 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 LSMEM2Q8N112 164 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 AHI1Q8N157 1196 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 CACTIN-AS1Q8N1I8 211 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 PDILTQ8N807 584 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 OR2T34Q8NGX1 318 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 OR14C36Q8NHC7 312 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 VCPIP1Q96JH7 1222 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 CDK5RAP1Q96SZ6 601 aaKnown RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 COL5A1P20908 1838 aaPredicted RBP10.07□□□□□ -0.8
IFT88-203ENST00000389373 TENM4Q6N022 2769 aa10.07□□□□□ -0.8
IFT88-203ENST00000389373 KNTC1P50748 2209 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3DA0A087WVF3 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3IA0A087WXS9 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3EA0A087X179 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3KA0A087X1G2 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3FA6NER0 549 aaPredicted RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 LRRIQ3A6PVS8 624 aaPredicted RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3LB9A6J9 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SIGLEC6O43699 453 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SIN3BO75182 1162 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 VNN1O95497 513 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 DLDP09622 509 aaKnown RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3HP0C7X1 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SLC8A1P32418 973 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 RXRGP48443 463 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 HARS2P49590 506 aaKnown RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 ASIC1P78348 528 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 KCNJ12Q14500 433 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms