RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CACNA2D2Q9NY47 1150 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 DONSONQ9NYP3 566 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 VPS28Q9UK41 221 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PCDHB7Q9Y5E2 793 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 AGLP35573 1532 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PDHXO00330 501 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PCNAP12004 261 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PSMC3P17980 439 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 DSG3P32926 999 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SERPINB8P50452 374 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 VGLL4Q14135 290 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 VWA5B1Q5TIE3 1220 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 AGAP9Q5VTM2 703 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PLEKHA7Q6IQ23 1121 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 LRRC74BQ6ZQY2 392 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TPGS1Q6ZTW0 290 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 AGBL3Q8NEM8 1001 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 BSNDQ8WZ55 320 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ZNF333Q96JL9 665 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 DCDC2Q9UHG0 476 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SLC27A5Q9Y2P5 690 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 FAM32AQ9Y421 112 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 C5orf58C9J3I9 102 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SNX3O60493 162 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PIGNO95427 931 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MT-ND1P03886 318 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MBL2P11226 248 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 OR1E1P30953 314 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ALDH6A1Q02252 535 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 CYP51A1Q16850 503 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 UNC5AQ6ZN44 842 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ZNF384Q8TF68 577 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 GLMNQ92990 594 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 C18orf25Q96B23 403 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MPP4Q96JB8 637 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 INPP4AQ96PE3 977 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 SYT15Q9BQS2 421 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 EFCAB1Q9HAE3 211 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SPON1Q9HCB6 807 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 BTRCQ9Y297 605 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SNX10Q9Y5X0 201 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MROH1Q8NDA8 1641 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MYH7P12883 1935 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 KLRG2A4D1S0 409 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 YDJCA8MPS7 323 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 AP3B1O00203 1094 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PQBP1O60828 265 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 CLPTM1O96005 669 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ALDH1A3P47895 512 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ALDH7A1P49419 539 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 CDH13P55290 713 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SEMA5AQ13591 1074 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 BOP1Q14137 746 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 STARD3Q14849 445 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 KRT72Q14CN4 511 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 STILQ15468 1287 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CCDC142Q17RM4 750 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PPP1R26Q5T8A7 1209 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 TEDDM1Q5T9Z0 273 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 BTBD10Q9BSF8 475 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ALG9Q9H6U8 611 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 C17orf75Q9HAS0 396 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CHCHD3Q9NX63 227 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 SLC17A6Q9P2U8 582 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SNX8Q9Y5X2 465 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 HEATR9A2RTY3 570 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 FFAR3O14843 346 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 GPR42O15529 346 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ODC1P11926 461 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SLC2A4P14672 509 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ATXN1P54253 815 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 MRPS35P82673 323 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 RAD51Q06609 339 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 C1QBPQ07021 282 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 ZNF177Q13360 481 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 DGCR6Q14129 220 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TMEM132BQ14DG7 1078 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 HSDL1Q3SXM5 330 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 FAM171A1Q5VUB5 890 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 HGSNATQ68CP4 663 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TTC39CQ8N584 583 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SH3TC2Q8TF17 1288 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TPD52L3Q96J77 140 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 HBEGFQ99075 208 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PARK7Q99497 189 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 SNRNP25Q9BV90 132 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 TM6SF2Q9BZW4 377 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CDHR5Q9HBB8 845 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MPP6Q9NZW5 540 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TP73O15350 636 aa5.1□□□□□ -1.59
LTN1-202ENST00000389194 SLC25A27O95847 323 aa5.1□□□□□ -1.59
LTN1-202ENST00000389194 DRD4P21917 467 aa5.1□□□□□ -1.59
LTN1-202ENST00000389194 ALDH9A1P49189 494 aa5.1□□□□□ -1.59
LTN1-202ENST00000389194 CLK2P49760 499 aaKnown RBP5.1□□□□□ -1.59
LTN1-202ENST00000389194 SCNN1GP51170 649 aa5.1□□□□□ -1.59
LTN1-202ENST00000389194 SH3BGRP55822 239 aaPredicted RBP5.1□□□□□ -1.59
LTN1-202ENST00000389194 YWHAZP63104 245 aaKnown RBP5.1□□□□□ -1.59
LTN1-202ENST00000389194 BST1Q10588 318 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms