RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ADAMTS9Q9P2N4 1935 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 METTL12A8MUP2 240 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 MSI1O43347 362 aaKnown RBP27.52■■■□□ 2
NPHP3-202ENST00000383282 RGS7P49802 495 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 ZNF423Q2M1K9 1284 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 UNC45BQ8IWX7 931 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 PPM1KQ8N3J5 372 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 IRGQQ8WZA9 623 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 DHTKD1Q96HY7 919 aaPredicted RBP27.52■■■□□ 2
NPHP3-202ENST00000383282 ABCB8Q9NUT2 735 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 MSRB2Q9Y3D2 182 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 FRYQ5TBA9 3013 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 PCNX2A6NKB5 2137 aa27.52■■■□□ 2
NPHP3-202ENST00000383282 M0QYV0 167 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 PMM2O15305 246 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 SH3BP5O60239 455 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 GJB3O75712 270 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 HLA-EP13747 358 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 SLC11A2P49281 568 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 CNGA2Q16280 664 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 NUGGCQ68CJ6 796 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 MSANTD2Q6P1R3 559 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 ZNF557Q8N988 423 aaPredicted RBP27.51■■□□□ 1.99
NPHP3-202ENST00000383282 SLC35F5Q8WV83 523 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 IRX2Q9BZI1 471 aaPredicted RBP27.51■■□□□ 1.99
NPHP3-202ENST00000383282 PCED1AQ9H1Q7 454 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 LHX5Q9H2C1 402 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 FBRSQ9HAH7 460 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 GGA2Q9UJY4 613 aa27.51■■□□□ 1.99
NPHP3-202ENST00000383282 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.51■■□□□ 1.99
NPHP3-202ENST00000383282 CFAP47Q6ZTR5 3102 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 CACNA1EQ15878 2313 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 BCAT2O15382 392 aaPredicted RBP27.5■■□□□ 1.99
NPHP3-202ENST00000383282 ATP5BP06576 529 aaKnown RBP27.5■■□□□ 1.99
NPHP3-202ENST00000383282 PABPC1P11940 636 aaKnown RBP27.5■■□□□ 1.99
NPHP3-202ENST00000383282 FAM193AP78312 1265 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 CAMK2GQ13555 558 aaPredicted RBP27.5■■□□□ 1.99
NPHP3-202ENST00000383282 TRIP6Q15654 476 aaKnown RBP27.5■■□□□ 1.99
NPHP3-202ENST00000383282 PMF1Q6P1K2 205 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.5■■□□□ 1.99
NPHP3-202ENST00000383282 CYB5D2Q8WUJ1 264 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 TFAP2BQ92481 460 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 HSFY1Q96LI6 401 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 TMEM245Q9H330 911 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 KLK13Q9UKR3 277 aa27.5■■□□□ 1.99
NPHP3-202ENST00000383282 MPP7Q5T2T1 576 aa27.49■■□□□ 1.99
NPHP3-202ENST00000383282 IL27RAQ6UWB1 636 aa27.49■■□□□ 1.99
NPHP3-202ENST00000383282 FAM124AQ86V42 546 aa27.49■■□□□ 1.99
NPHP3-202ENST00000383282 NAXDQ8IW45 347 aa27.49■■□□□ 1.99
NPHP3-202ENST00000383282 PIK3R2O00459 728 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 P4HA2O15460 535 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 IRAK2O43187 625 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 FBXO21O94952 628 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 CER1O95813 267 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 LTFP02788 710 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 BRD2P25440 801 aaKnown RBP27.48■■□□□ 1.99
NPHP3-202ENST00000383282 MBLAC2Q68D91 279 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 ISM2Q6H9L7 571 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 ADIPOR2Q86V24 386 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 SNX19Q92543 992 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 CAMK1GQ96NX5 476 aa27.48■■□□□ 1.99
NPHP3-202ENST00000383282 EIF2B4Q9UI10 523 aaKnown RBP27.48■■□□□ 1.99
NPHP3-202ENST00000383282 TYW5A2RUC4 315 aaKnown RBP27.47■■□□□ 1.99
NPHP3-202ENST00000383282 TBL1XO60907 577 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 DLDP09622 509 aaKnown RBP27.47■■□□□ 1.99
NPHP3-202ENST00000383282 POLR2EP19388 210 aaKnown RBP27.47■■□□□ 1.99
NPHP3-202ENST00000383282 MATKP42679 507 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 TBX4P57082 545 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 RING1Q06587 406 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 PIK3R6Q5UE93 754 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 KIAA0907Q7Z7F0 614 aaPredicted RBP27.47■■□□□ 1.99
NPHP3-202ENST00000383282 CHCHD4Q8N4Q1 142 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 ZCCHC14Q8WYQ9 949 aaKnown RBP27.47■■□□□ 1.99
NPHP3-202ENST00000383282 DDX50Q9BQ39 737 aaKnown RBP27.47■■□□□ 1.99
NPHP3-202ENST00000383282 GAREM1Q9H706 876 aa27.47■■□□□ 1.99
NPHP3-202ENST00000383282 CKAP5Q14008 2032 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 BICDL2A1A5D9 508 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 ACSL4O60488 711 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 IGLV3-27P01718 113 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 DNTTP04053 509 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 SGSHP51688 502 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 ZBTB16Q05516 673 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 KLHL10Q6JEL2 608 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 RFWD3Q6PCD5 774 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 ELOA2Q8IYF1 753 aaPredicted RBP27.46■■□□□ 1.99
NPHP3-202ENST00000383282 ZNF366Q8N895 744 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 KAT5Q92993 513 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 BTBD1Q9H0C5 482 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 SUN2Q9UH99 717 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 MAN1B1Q9UKM7 699 aa27.46■■□□□ 1.99
NPHP3-202ENST00000383282 RNF225M0QZC1 329 aaPredicted RBP27.45■■□□□ 1.98
NPHP3-202ENST00000383282 GCNT1Q02742 428 aa27.45■■□□□ 1.98
NPHP3-202ENST00000383282 PTPRNQ16849 979 aa27.45■■□□□ 1.98
NPHP3-202ENST00000383282 TTC31Q49AM3 519 aaPredicted RBP27.45■■□□□ 1.98
NPHP3-202ENST00000383282 MFN1Q8IWA4 741 aa27.45■■□□□ 1.98
NPHP3-202ENST00000383282 CCDC117Q8IWD4 279 aaPredicted RBP27.45■■□□□ 1.98
NPHP3-202ENST00000383282 CLEC4CQ8WTT0 213 aa27.45■■□□□ 1.98
NPHP3-202ENST00000383282 AZIN2Q96A70 460 aa27.45■■□□□ 1.98
NPHP3-202ENST00000383282 SERPINB11Q96P15 392 aa27.45■■□□□ 1.98
NPHP3-202ENST00000383282 ZSWIM1Q9BR11 485 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms