RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ZC3H11AO75152 810 aaKnown RBP eCLIP5.99□□□□□ -1.45
RFX3-204ENST00000382004 FKBP6O75344 327 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 PDHBP11177 359 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MYL4P12829 197 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 NPY2RP49146 381 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 POU6F1Q14863 301 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 GNASQ5JWF2 1037 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ARHGAP22Q7Z5H3 698 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 KBTBD7Q8WVZ9 684 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TEKT5Q96M29 485 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TRAPPC9Q96Q05 1148 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 PTGFRNQ9P2B2 879 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 DRG1Q9Y295 367 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 MYRFQ9Y2G1 1151 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ZNF432O94892 652 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 DNAJB2P25686 324 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ADSLP30566 484 aaPredicted RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 COPZ1P61923 177 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MPP3Q13368 585 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TFDP3Q5H9I0 405 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 HERC6Q8IVU3 1022 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 COLGALT2Q8IYK4 626 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 CASKIN2Q8WXE0 1202 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 YME1L1Q96TA2 773 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 UGT2B28Q9BY64 529 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TRIM9Q9C026 710 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 NEK6Q9HC98 313 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ABCB10Q9NRK6 738 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 INSRP06213 1382 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 A0A0X1KG70 313 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 SSU72P8A0A1W2PR75 194 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 CHP2O43745 196 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 IFNA16P05015 189 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 PTPN3P26045 913 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 CBX5P45973 191 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 BST2Q10589 180 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 ALG11Q2TAA5 492 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MSANTD1Q6ZTZ1 278 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 OR6Y1Q8NGX8 325 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ITFG1Q8TB96 612 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ZNF354BQ96LW1 612 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 C1QTNF1Q9BXJ1 281 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 SENP6Q9GZR1 1112 aaPredicted RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 ZFYVE28Q9HCC9 887 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 COG5Q9UP83 839 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 FAM50BQ9Y247 325 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 SLC25A12O75746 678 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 CHRNGP07510 517 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 FDX1P10109 184 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 UQCRBP14927 111 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 RAG1P15918 1043 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 FMR1Q06787 632 aaKnown RBP eCLIP5.99□□□□□ -1.45
RFX3-204ENST00000382004 QPRTQ15274 297 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 PRMT9Q6P2P2 845 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 SRBD1Q8N5C6 995 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 SAMD3Q8N6K7 520 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MID1IP1Q9NPA3 183 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 VPS51Q9UID3 782 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 INVSQ9Y283 1065 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ATXN2Q99700 1313 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 TIPRLO75663 272 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TNFAIP8O95379 198 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 JCHAINP01591 159 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 RPL4P36578 427 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 RXRGP48443 463 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MARSP56192 900 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 GRSF1Q12849 480 aaKnown RBP eCLIP5.99□□□□□ -1.45
RFX3-204ENST00000382004 MAD2L1Q13257 205 aaPredicted RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 SPIDRQ14159 915 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 RNASE12Q5GAN4 147 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 ULK2Q8IYT8 1036 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 OR52L1Q8NGH7 329 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TMEM159Q96B96 161 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 FRMD8Q9BZ67 464 aaPredicted RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 CRISPLD1Q9H336 500 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 REEP1Q9H902 201 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
RFX3-204ENST00000382004 VANGL2Q9ULK5 521 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ACOT9Q9Y305 439 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 CES2O00748 559 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 LYNP07948 512 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 GARTP22102 1010 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 ATP5F1P24539 256 aaPredicted RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 IDH2P48735 452 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 CPT1AP50416 773 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 FXR1P51114 621 aaKnown RBP eCLIP5.99□□□□□ -1.45
RFX3-204ENST00000382004 LSM3P62310 102 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 RAPSNQ13702 412 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 PERM1Q5SV97 790 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MARK2Q7KZI7 788 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 PARP8Q8N3A8 854 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 LPCAT1Q8NF37 534 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 TRNT1Q96Q11 434 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 TARS2Q9BW92 718 aaKnown RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 FKBP14Q9NWM8 211 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 MARK1Q9P0L2 795 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 AKAP7Q9P0M2 348 aaPredicted RBP5.99□□□□□ -1.45
RFX3-204ENST00000382004 SHOC2Q9UQ13 582 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 PRKAB1Q9Y478 270 aa5.99□□□□□ -1.45
RFX3-204ENST00000382004 RAPGEF6Q8TEU7 1601 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms