RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 TEX9Q8N6V9 391 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
TRIM23-203ENST00000381018 FAM149B1Q96BN6 582 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 RNF19AQ9NV58 838 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 THAP1Q9NVV9 213 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 HBS1LQ9Y450 684 aaKnown RBP12.28□□□□□ -0.44
TRIM23-203ENST00000381018 NR2E3Q9Y5X4 410 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 SHROOM3Q8TF72 1996 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 SMIM28A0A1B0GU29 152 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 F5H423 210 aaPredicted RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 PDHXO00330 501 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 GLRA3O75311 464 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 KITP10721 976 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 GLUD2P49448 558 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 AQP5P55064 265 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 ADIGQ0VDE8 80 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 AP1B1Q10567 949 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 WASHC5Q12768 1159 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 KPNB1Q14974 876 aaKnown RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 PDK1Q15118 436 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 CCDC6Q16204 474 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 TSNAXIP1Q2TAA8 658 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 HSF5Q4G112 596 aaPredicted RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 LDLRAD1Q5T700 205 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 PACS1Q6VY07 963 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 KIRREL3Q8IZU9 778 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 RNF139Q8WU17 664 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 STMN2Q93045 179 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 ATP2A3Q93084 1043 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 MAML3Q96JK9 1138 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 TSPAN18Q96SJ8 248 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 SIKE1Q9BRV8 207 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 NAT9Q9BTE0 207 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.44
TRIM23-203ENST00000381018 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 PIN4Q9Y237 131 aaKnown RBP12.27□□□□□ -0.44
TRIM23-203ENST00000381018 NRCAMQ92823 1304 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 SMIM35A0A1B0GVV1 85 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 B2RBV5 119 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 PPP1R12AO14974 1030 aaPredicted RBP12.27□□□□□ -0.45
TRIM23-203ENST00000381018 HUS1O60921 280 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 ENO1P06733 434 aaKnown RBP12.27□□□□□ -0.45
TRIM23-203ENST00000381018 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 ATP6V1C1P21283 382 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 MGAT1P26572 445 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 TKTP29401 623 aaKnown RBP12.27□□□□□ -0.45
TRIM23-203ENST00000381018 GCKP35557 465 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 PGM1P36871 562 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 SESN2P58004 480 aaPredicted RBP12.27□□□□□ -0.45
TRIM23-203ENST00000381018 CRADDP78560 199 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 RCN1Q15293 331 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 FASTKD1Q53R41 847 aaKnown RBP12.27□□□□□ -0.45
TRIM23-203ENST00000381018 DCAF6Q58WW2 860 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 ACSBG2Q5FVE4 666 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 IQSEC1Q6DN90 963 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 LIMS2Q7Z4I7 341 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 PIGZQ86VD9 579 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 UNC5BQ8IZJ1 945 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 B3GALNT2Q8NCR0 500 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 P2RY11Q96G91 374 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 ZNF395Q9H8N7 513 aaPredicted RBP12.27□□□□□ -0.45
TRIM23-203ENST00000381018 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 KLK14Q9P0G3 267 aa12.27□□□□□ -0.45
TRIM23-203ENST00000381018 TPP1O14773 563 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 MAGEC1O60732 1142 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 TOP3BO95985 862 aaKnown RBP12.26□□□□□ -0.45
TRIM23-203ENST00000381018 ALDOAP04075 364 aaKnown RBP12.26□□□□□ -0.45
TRIM23-203ENST00000381018 CYP2C9P11712 490 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 KCNE1P15382 129 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 ACADSP16219 412 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 PSMB4P28070 264 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 NOS2P35228 1153 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 VHLP40337 213 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 BLMHQ13867 455 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 OTUD1Q5VV17 481 aaPredicted RBP12.26□□□□□ -0.45
TRIM23-203ENST00000381018 TRIM68Q6AZZ1 485 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 ZCCHC23Q6ZST2 131 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 TREML1Q86YW5 311 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 WDR75Q8IWA0 830 aaKnown RBP12.26□□□□□ -0.45
TRIM23-203ENST00000381018 CCNYQ8ND76 341 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 NT5C3BQ969T7 300 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 RILPQ96NA2 401 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 HNRNPABQ99729 332 aaKnown RBP12.26□□□□□ -0.45
TRIM23-203ENST00000381018 DUSP16Q9BY84 665 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 C20orf27Q9GZN8 174 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 SEPT10Q9P0V9 454 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 SLC17A6Q9P2U8 582 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 DCDC2Q9UHG0 476 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 TAGLN3Q9UI15 199 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 STAP1Q9ULZ2 295 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
TRIM23-203ENST00000381018 MBLAC1A4D2B0 266 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms