RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 UNC93AQ86WB7 457 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 FAM217AQ8IXS0 508 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 GANCQ8TET4 914 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 WBP1Q96G27 269 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 CDK5RAP1Q96SZ6 601 aaKnown RBP18.13■□□□□ 0.49
HMGN1-203ENST00000380748 MTG2Q9H4K7 406 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 FBRSQ9HAH7 460 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 AASDHPPTQ9NRN7 309 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 SERGEFQ9UGK8 458 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 CLCA2Q9UQC9 943 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 COL12A1Q99715 3063 aa18.13■□□□□ 0.49
HMGN1-203ENST00000380748 A0A1W2PR77 199 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 SLC12A8A0AV02 714 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 B8ZZF3 427 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
HMGN1-203ENST00000380748 C4BPAP04003 597 aaKnown RBP18.12■□□□□ 0.49
HMGN1-203ENST00000380748 ASPAP45381 313 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 INSM1Q01101 510 aaPredicted RBP18.12■□□□□ 0.49
HMGN1-203ENST00000380748 KCNC4Q03721 635 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 BNIP3Q12983 259 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 FAM26FQ5R3K3 315 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 SPOPLQ6IQ16 392 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 NCEH1Q6PIU2 408 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 ADIPOR2Q86V24 386 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 DCBLD1Q8N8Z6 715 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 WFIKKN2Q8TEU8 576 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 SKA1Q96BD8 255 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 CYFIP2Q96F07 1278 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 PABPC3Q9H361 631 aaKnown RBP18.12■□□□□ 0.49
HMGN1-203ENST00000380748 GDF3Q9NR23 364 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 ABCB8Q9NUT2 735 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 MARCH2Q9P0N8 246 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 USP3Q9Y6I4 520 aa18.12■□□□□ 0.49
HMGN1-203ENST00000380748 YKT6O15498 198 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 EXOC3O60645 756 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 KIF20AO95235 890 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 P4HA1P13674 534 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 CKMT2P17540 419 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 CD38P28907 300 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 GALCP54803 685 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 TMPRSS3P57727 454 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
HMGN1-203ENST00000380748 ILKQ13418 452 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 KCNJ12Q14500 433 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 KDM7AQ6ZMT4 941 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 ZNF248Q8NDW4 579 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 PARD3BQ8TEW8 1205 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 RFFLQ8WZ73 363 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 GOLGA1Q92805 767 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 NCKAP1Q9Y2A7 1128 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 PCDHB1Q9Y5F3 818 aa18.11■□□□□ 0.49
HMGN1-203ENST00000380748 UBE4BO95155 1302 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 STX6O43752 255 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 DLDP09622 509 aaKnown RBP18.1■□□□□ 0.49
HMGN1-203ENST00000380748 C6P13671 934 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 ARRB1P49407 418 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-203ENST00000380748 ASIC1P78348 528 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 CLDN10P78369 228 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 PKDCCQ504Y2 493 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 MPPE1Q53F39 396 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 SFMBT2Q5VUG0 894 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 MBLAC2Q68D91 279 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 USP30Q70CQ3 517 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 RSRC2Q7L4I2 434 aaKnown RBP18.1■□□□□ 0.49
HMGN1-203ENST00000380748 KANSL1Q7Z3B3 1105 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 C12orf56Q8IXR9 622 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 CACTIN-AS1Q8N1I8 211 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 RSPH9Q9H1X1 276 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-203ENST00000380748 TNMDQ9H2S6 317 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 FBXL12Q9NXK8 326 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 GGA2Q9UJY4 613 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 STRIP2Q9ULQ0 834 aa18.1■□□□□ 0.49
HMGN1-203ENST00000380748 A0A1W2PP55 124 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-203ENST00000380748 PABPC1P11940 636 aaKnown RBP18.09■□□□□ 0.49
HMGN1-203ENST00000380748 KRT10P13645 584 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 AP3M2P53677 418 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 PCBP4P57723 403 aaKnown RBP18.09■□□□□ 0.49
HMGN1-203ENST00000380748 NXPH1P58417 271 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 SNRPFP62306 86 aaKnown RBP18.09■□□□□ 0.49
HMGN1-203ENST00000380748 DLG4P78352 724 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 PDE4CQ08493 712 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 SGSM1Q2NKQ1 1148 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 BROXQ5VW32 411 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 KIAA0907Q7Z7F0 614 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-203ENST00000380748 AHI1Q8N157 1196 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.09■□□□□ 0.49
HMGN1-203ENST00000380748 WFDC5Q8TCV5 224 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 TTC9Q92623 222 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 HIC2Q96JB3 615 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 NEUROG2Q9H2A3 272 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 ADAMTS1Q9UHI8 967 aa18.09■□□□□ 0.49
HMGN1-203ENST00000380748 MID1O15344 667 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 WISP1O95388 367 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 MT-CO3P00414 261 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 SGSHP51688 502 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 UCNP55089 124 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms