RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PDE6CP51160 858 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 ATXN3P54252 364 aaPredicted RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 SIM1P81133 766 aaPredicted RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 COG7P83436 770 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 LRRC63Q05C16 580 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 GOLGA8FQ08AF8 430 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 GOLGA8DPQ0D2H9 430 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 PLEKHG6Q3KR16 790 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 FAM133BQ5BKY9 247 aaKnown RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 RAB41Q5JT25 222 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 KCNT1Q5JUK3 1230 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 FAM182AQ5T1J6 154 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 LYSMD4Q5XG99 296 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 TRIM65Q6PJ69 517 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 LEKR1Q6ZMV7 388 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 LPCAT2Q7L5N7 544 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 TRIM59Q8IWR1 403 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 APCDD1Q8J025 514 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 WDTC1Q8N5D0 677 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 GANCQ8TET4 914 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 ZNF606Q8WXB4 792 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 MSANTD3Q96H12 275 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 ZC3H10Q96K80 434 aaKnown RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 C6orf106Q9H6K1 298 aaPredicted RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 PRDM16Q9HAZ2 1276 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 CD248Q9HCU0 757 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 KIAA1468Q9P260 1216 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 ZMYM5Q9UJ78 669 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 INTS6Q9UL03 887 aaKnown RBP4.86□□□□□ -1.63
C9orf72-203ENST00000380003 COQ4Q9Y3A0 265 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 IGSF10Q6WRI0 2623 aa4.86□□□□□ -1.63
C9orf72-203ENST00000380003 TTC34A8MYJ7 566 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 I6L893 689 aaPredicted RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 FOXN3O00409 490 aaPredicted RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 WNT9AO14904 365 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 XPO1O14980 1071 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 SH3BP5O60239 455 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 SYNCRIPO60506 623 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 EPN2O95208 641 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 PAPSS2O95340 614 aaPredicted RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 GNA15P30679 374 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CNR2P34972 360 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 GPD2P43304 727 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 TUBP50607 506 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MRPS21P82921 87 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 STIM1Q13586 685 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 ST3GAL2Q16842 350 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 PTPRNQ16849 979 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 PKDCCQ504Y2 493 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 FNDC3BQ53EP0 1204 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 EOGTQ5NDL2 527 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 SDE2Q6IQ49 451 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CHST9Q7L1S5 443 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 TAC4Q86UU9 113 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 ADIPOR2Q86V24 386 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MFN1Q8IWA4 741 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CHCHD4Q8N4Q1 142 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MINDY1Q8N5J2 469 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 EHBP1Q8NDI1 1231 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 SIPA1Q96FS4 1042 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 SCNM1Q9BWG6 230 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 STRIP2Q9ULQ0 834 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CA5BQ9Y2D0 317 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 URB1O60287 2271 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MAPK13O15264 365 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 ALDH1A2O94788 518 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 AFPP02771 609 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 LTFP02788 710 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 VDRP11473 427 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 TRIM21P19474 475 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MZF1P28698 734 aaPredicted RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CHKAP35790 457 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MTIF2P46199 727 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 COPAP53621 1224 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 ZNF252P-AS1Q0IIN9 211 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 TPD52L1Q16890 204 aaPredicted RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 ARHGAP17Q68EM7 881 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 PM20D1Q6GTS8 502 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 LCLAT1Q6UWP7 414 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 DDX42Q86XP3 938 aaKnown RBP eCLIP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 MMAAQ8IVH4 418 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 DQX1Q8TE96 717 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 OVCA2Q8WZ82 227 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 KLK6Q92876 244 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 RNF34Q969K3 372 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CCDC34Q96HJ3 373 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 DHTKD1Q96HY7 919 aaPredicted RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
C9orf72-203ENST00000380003 VPS16Q9H269 839 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 VPS45Q9NRW7 570 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 CLIC5Q9NZA1 410 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 VANGL2Q9ULK5 521 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 PLA2G4CQ9UP65 541 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 FAM208BQ5VWN6 2430 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 A0A1W2PP55 124 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 PRR5-ARHGAP8B1AHC4 643 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 K7ERQ8 282 aa4.85□□□□□ -1.63
C9orf72-203ENST00000380003 EPHB6O15197 1021 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms