RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 PPM1LQ5SGD2 360 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 PLEKHA7Q6IQ23 1121 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 OSBP2Q969R2 916 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 KLF15Q9UIH9 416 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 NR2E3Q9Y5X4 410 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 A0A1W2PRG6 482 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 H3BN98 237 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNF354BQ96LW1 612 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 PHF20Q9BVI0 1012 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 LY9Q9HBG7 655 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 HECW2Q9P2P5 1572 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 SERPINB5P36952 375 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 MCAMP43121 646 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 MYBPC1Q00872 1141 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 EPHA7Q15375 998 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CAPSLQ8WWF8 208 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CD3EAPO15446 510 aaKnown RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 MSH4O15457 936 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 LCA5LO95447 670 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 LGALS3BPQ08380 585 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 TRAF2Q12933 501 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 PYCARDQ9ULZ3 195 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 LRRIQ1Q96JM4 1722 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 UBE2QL1A1L167 161 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 VBP1P61758 197 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 DMPKQ09013 629 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 VANGL2Q9ULK5 521 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 A0A0X1KG70 313 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 KMOO15229 486 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CCNT2O60583 730 aaKnown RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 RRM1P23921 792 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CTCFP49711 727 aaPredicted RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 AKIRIN2Q53H80 203 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 OLFML2AQ68BL7 652 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 N6AMT1Q9Y5N5 214 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 IGSF6O95976 241 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 SARSP49591 514 aaKnown RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 NFYCQ13952 458 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 LAYNQ6UX15 382 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 RBBP8NLQ8NC74 664 aaPredicted RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC24A3Q9HC58 644 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 HEATR5BQ9P2D3 2071 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 M0QYT0 321 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 KATNA1O75449 491 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 RAG1P15918 1043 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNF484Q5JVG2 852 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 SLFN11Q7Z7L1 901 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 FAIM2Q9BWQ8 316 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 TBKBP1A7MCY6 615 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 BTN3A3O00478 584 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CYB561D2O14569 222 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 GSTM5P46439 218 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 PIK3CGP48736 1102 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 IRX1P78414 480 aaPredicted RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 NANOGNBQ7Z5D8 188 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 AP3S1Q92572 193 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 AP3M1Q9Y2T2 418 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 OR56A5P0C7T3 313 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 NPR3P17342 541 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 INAVAQ3KP66 663 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 MROH9Q5TGP6 573 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 LRRC40Q9H9A6 602 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 METTL5Q9NRN9 209 aaKnown RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 ATAD3AQ9NVI7 634 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CBX4O00257 560 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 GIMD1P0DJR0 217 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 STK40Q8N2I9 435 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 EPS8Q12929 822 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 C18orf25Q96B23 403 aaPredicted RBP11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 TRIM2Q9C040 744 aa11.48□□□□□ -0.57
PTCHD1-201ENST00000379361 IGF2BP3O00425 579 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 NMT2O60551 498 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 CLK2P49760 499 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 IL17REQ8NFR9 667 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 CNGB3Q9NQW8 809 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 WRBO00258 174 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 IL5RAQ01344 420 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 RGS1Q08116 209 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 MAGED4Q96JG8 741 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 VPS35Q96QK1 796 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 STARD7Q9NQZ5 370 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 PCDHGA3Q9Y5H0 932 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 RPS6KL1Q9Y6S9 549 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 PLIN5Q00G26 463 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 GALNT3Q14435 633 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNF57Q68EA5 555 aaPredicted RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TDRD5Q8NAT2 981 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 STX16-NPEPL1H3BU86 382 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 STX16O14662 325 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms