RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MTF2Q9Y483 593 aaPredicted RBP19.43■□□□□ 0.7
SSU72-203ENST00000378725 A0A0A0MRY4 1105 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 EIF3CLB5ME19 914 aaKnown RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 CACNG3O60359 315 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 CYBBP04839 570 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 TYRP14679 529 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 CYLC1P35663 651 aaPredicted RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 SLC6A11P48066 632 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 CLCN5P51795 746 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 ZNF252P-AS1Q0IIN9 211 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 FZD5Q13467 585 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 CDO1Q16878 200 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 TMEM196Q5HYL7 178 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 MS4A13Q5J8X5 152 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 MPP7Q5T2T1 576 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 ACBD5Q5T8D3 534 aaPredicted RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 RNF43Q68DV7 783 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 NAIF1Q69YI7 327 aaPredicted RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 CWF19L1Q69YN2 538 aaKnown RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 RFWD3Q6PCD5 774 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 C12orf40Q86WS4 652 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 CTNNBL1Q8WYA6 563 aaPredicted RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 CD101Q93033 1021 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 EXOC4Q96A65 974 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 C1orf74Q96LT6 269 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 HAPLN3Q96S86 360 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 EIF3CQ99613 913 aaKnown RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 P2RY13Q9BPV8 354 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 NUP85Q9BW27 656 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 MFSD1Q9H3U5 465 aa19.42■□□□□ 0.7
SSU72-203ENST00000378725 FBRSL1Q9HCM7 1045 aaKnown RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 EPN1Q9Y6I3 576 aaPredicted RBP19.42■□□□□ 0.7
SSU72-203ENST00000378725 COL4A3Q01955 1670 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 SOWAHDA6NJG2 315 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 FAM170BA6NMN3 283 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 PRR33A8MZF0 331 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 NEDD8-MDP1E9PL57 170 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 TSPAN3O60637 253 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 PAGE1O75459 146 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 TACR2P21452 398 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 PSMA2P25787 234 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 TARSP26639 723 aaKnown RBP19.41■□□□□ 0.7
SSU72-203ENST00000378725 ADRA1BP35368 520 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 ACAP1Q15027 740 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 PON2Q15165 354 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 RAP1GAP2Q684P5 730 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 RAD9BQ6WBX8 426 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 FAM131BQ86XD5 332 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 SUGP1Q8IWZ8 645 aaKnown RBP19.41■□□□□ 0.7
SSU72-203ENST00000378725 ARFGAP1Q8N6T3 406 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 FLCNQ8NFG4 579 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 PJA1Q8NG27 643 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 DDI1Q8WTU0 396 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 MYEOVQ96EZ4 313 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 XPO6Q96QU8 1125 aaKnown RBP19.41■□□□□ 0.7
SSU72-203ENST00000378725 FOXQ1Q9C009 403 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 UVRAGQ9P2Y5 699 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 SIT1Q9Y3P8 196 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 HS3ST4Q9Y661 456 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 TECTAO75443 2155 aa19.41■□□□□ 0.7
SSU72-203ENST00000378725 FAM86C2PA6NEL3 165 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 STK25O00506 426 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 NDUFA10O95299 355 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 CISD3P0C7P0 127 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 CHRNB1P11230 501 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 DESP17661 470 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 MAGEA1P43355 309 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 SGSHP51688 502 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 GRSF1Q12849 480 aaKnown RBP eCLIP19.4■□□□□ 0.7
SSU72-203ENST00000378725 TCEAL1Q15170 157 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 C5orf22Q49AR2 442 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 TMEM31Q5JXX7 168 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 ASTLQ6HA08 431 aaPredicted RBP19.4■□□□□ 0.7
SSU72-203ENST00000378725 FSTL4Q6MZW2 842 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 PHTF2Q8N3S3 785 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 FBXL6Q8N531 539 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 NAT16Q8N8M0 369 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 NTAN1Q96AB6 310 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 CLDN23Q96B33 292 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 PRICKLE1Q96MT3 831 aaPredicted RBP19.4■□□□□ 0.7
SSU72-203ENST00000378725 PNKPQ96T60 521 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 SLC2A11Q9BYW1 496 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 PLK2Q9NYY3 685 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 PCDHA13Q9Y5I0 950 aa19.4■□□□□ 0.7
SSU72-203ENST00000378725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.39■□□□□ 0.69
SSU72-203ENST00000378725 PI15O43692 258 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 TULP3O75386 442 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 AOC1P19801 751 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 DRD1P21728 446 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 HOXD9P28356 352 aaPredicted RBP19.39■□□□□ 0.69
SSU72-203ENST00000378725 AUHQ13825 339 aaKnown RBP19.39■□□□□ 0.69
SSU72-203ENST00000378725 PIGHQ14442 188 aaPredicted RBP19.39■□□□□ 0.69
SSU72-203ENST00000378725 GSE1Q14687 1217 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 UBXN2BQ14CS0 331 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 SPA17Q15506 151 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 ARL13BQ3SXY8 428 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 ARTNQ5T4W7 220 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 FBXL22Q6P050 247 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 CHSY1Q86X52 802 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 CCDC105Q8IYK2 499 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms