RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 SLC11A2P49281 568 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 ZXDBP98169 803 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 MTA1Q13330 715 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 TUBB2AQ13885 445 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 TFDP3Q5H9I0 405 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 KAZNQ674X7 775 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 ANKS1BQ7Z6G8 1248 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 ADAMTS19Q8TE59 1207 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 MSLNLQ96KJ4 702 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 GUCD1Q96NT3 240 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 EPAS1Q99814 870 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 HEMGNQ9BXL5 484 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 OSBPL8Q9BZF1 889 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 OSBPL2Q9H1P3 480 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 SMARCAL1Q9NZC9 954 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 CFAP97Q9P2B7 532 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 OR12D3Q9UGF7 316 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 SH3BP1Q9Y3L3 701 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 MRFAP1Q9Y605 127 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 HS3ST4Q9Y661 456 aa16.33■□□□□ 0.2
CCDC107-204ENST00000378409 hCG_1818297A0A087WSY0 165 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 FAM72CH0Y354 149 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 H3BRJ5 948 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 PGRMC1O00264 195 aaKnown RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 LEFTY2O00292 366 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 SCAMP3O14828 347 aaKnown RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 PRAMEF12O95522 483 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 FGGP02679 453 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 KLKB1P03952 638 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 KRT10P13645 584 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 GOT1P17174 413 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 MTHFRP42898 656 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 TPI1P60174 286 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 SEMA3BQ13214 749 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 SKIV2LQ15477 1246 aaKnown RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 PPP2R5EQ16537 467 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 MS4A13Q5J8X5 152 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 FAM72AQ5TYM5 149 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 PIK3R6Q5UE93 754 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 RAP1GAP2Q684P5 730 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 FAM72DQ6L9T8 149 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 POTEHQ6S545 545 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 CHSY1Q86X52 802 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 FAM72BQ86X60 149 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 RFX6Q8HWS3 928 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 CREG2Q8IUH2 290 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 NPAS3Q8IXF0 933 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 RASGEF1CQ8N431 466 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 ZSCAN18Q8TBC5 510 aaPredicted RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 TSC1Q92574 1164 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 FGF13Q92913 245 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 USP13Q92995 863 aaPredicted RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 ZNF670Q9BS34 389 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 DCLK3Q9C098 648 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 TDP1Q9NUW8 608 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 CWC15Q9P013 229 aaKnown RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 CD207Q9UJ71 328 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 LSM7Q9UK45 103 aaKnown RBP16.32■□□□□ 0.2
CCDC107-204ENST00000378409 CCL26Q9Y258 94 aa16.32■□□□□ 0.2
CCDC107-204ENST00000378409 MYOFQ9NZM1 2061 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 NUP205Q92621 2012 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 EEF2KO00418 725 aaKnown RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 DAPK3O43293 454 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 ACSL4O60488 711 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 IL4RP24394 825 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 PTPN7P35236 360 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 PAFAH1B1P43034 410 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 MLLT6P55198 1093 aaPredicted RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 TAZQ16635 292 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 WHAMMP3Q1A5X7 153 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 LONRF2Q1L5Z9 754 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 ANKRD20A8PQ5CZ79 823 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 NADSYN1Q6IA69 706 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 SLC13A5Q86YT5 568 aaPredicted RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 ARID3BQ8IVW6 561 aaPredicted RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 ACTRT1Q8TDG2 376 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 SH3RF2Q8TEC5 729 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 AZIN2Q96A70 460 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 C1orf74Q96LT6 269 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 CSPG4P5Q96PW8 444 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 HERPUD2Q9BSE4 406 aa16.31■□□□□ 0.2
CCDC107-204ENST00000378409 MAK16Q9BXY0 300 aaKnown RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 RCOR3Q9P2K3 495 aaPredicted RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 TTC7AQ9ULT0 858 aaPredicted RBP16.31■□□□□ 0.2
CCDC107-204ENST00000378409 SHROOM3Q8TF72 1996 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 GOLGA6L7A0A1B0GV03 622 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 E9PAM4 449 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 H3BQ06 376 aaPredicted RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 PDE2AO00408 941 aaPredicted RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 LRIG2O94898 1065 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 TACR2P21452 398 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 ZNF135P52742 658 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms