RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TPST1O60507 370 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ASMTLO95671 621 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ITGAVP06756 1048 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 HIST1H2AGP0C0S8 130 aaPredicted RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ERCC2P18074 760 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 HIST1H2ADP20671 130 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 RAB27AP51159 221 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 NME5P56597 212 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 TAF5Q15542 800 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 HIST1H2AHQ96KK5 128 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 HIST1H2AJQ99878 128 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 H2AFJQ9BTM1 129 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 TRIM15Q9C019 465 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 TTC36A6NLP5 189 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 PHGDHO43175 533 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ARIH2O95376 493 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 MMP3P08254 477 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CD48P09326 243 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 FSTL1Q12841 308 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 RARS2Q5T160 578 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ELMSAN1Q6PJG2 1045 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 RNF217Q8TC41 542 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 PLEKHO2Q8TD55 490 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 DDI1Q8WTU0 396 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 APOPT1Q96IL0 206 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 KDM4CQ9H3R0 1056 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 V9GYQ6 96 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 GLTPD2A6NH11 291 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 SNX3O60493 162 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CILPO75339 1184 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 OXCT1P55809 520 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CYTH1Q15438 398 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CNGA3Q16281 694 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 GALNT4Q8N4A0 578 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 TEX9Q8N6V9 391 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ATXN2LQ8WWM7 1075 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ING2Q9H160 280 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CRLS1Q9UJA2 301 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 COQ4Q9Y3A0 265 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 A0A0A0MRY4 1105 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 ERI2A8K979 691 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 YWHAQP27348 245 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 FLT3LGP49771 235 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 MRPS6P82932 125 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 TUBGCP3Q96CW5 907 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 SPATA13Q96N96 652 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 MRPL40Q9NQ50 206 aaKnown RBP13.53□□□□□ -0.24
NPHP4-203ENST00000378169 FAM105AQ9NUU6 356 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 IPPQ9Y573 584 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 SLC4A7Q9Y6M7 1214 aa13.53□□□□□ -0.24
NPHP4-203ENST00000378169 CNTNAP1P78357 1384 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 A0A1W2PPM1 405 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 C2orf81A6NN90 581 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 AGPSO00116 658 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 FANCGO15287 622 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 RHOCP08134 193 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 WEE1P30291 646 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 RENBPP51606 427 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 GBE1Q04446 702 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 PMF1Q6P1K2 205 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 SUGP1Q8IWZ8 645 aaKnown RBP13.52□□□□□ -0.24
NPHP4-203ENST00000378169 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 DNAJC9Q8WXX5 260 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 UBE2OQ9C0C9 1292 aaKnown RBP13.52□□□□□ -0.24
NPHP4-203ENST00000378169 TXNRD2Q9NNW7 524 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.24
NPHP4-203ENST00000378169 FZD9O00144 591 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 SEC24DO94855 1032 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-203ENST00000378169 CFHP08603 1231 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 LAMB3Q13751 1172 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 ARHGEF7Q14155 803 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 SLC10A6Q3KNW5 377 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 MFN1Q8IWA4 741 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 FBXO44Q9H4M3 255 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 FCHO1O14526 889 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 LRG1P02750 347 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 FASTKD3Q14CZ7 662 aaKnown RBP13.52□□□□□ -0.25
NPHP4-203ENST00000378169 SEL1L3Q68CR1 1132 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 MSL3Q8N5Y2 521 aaKnown RBP13.52□□□□□ -0.25
NPHP4-203ENST00000378169 CKAP2Q8WWK9 683 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 EME1Q96AY2 570 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 SPATA17Q96L03 361 aa13.52□□□□□ -0.25
NPHP4-203ENST00000378169 PCDH18Q9HCL0 1135 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms