RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 NDNQ99608 321 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 OMDQ99983 421 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ST6GALNAC4Q9H4F1 302 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 BPIFA1Q9NP55 256 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 PIGVQ9NUD9 493 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 WDR35Q9P2L0 1181 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ACTL7AQ9Y615 435 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TRIP12Q14669 1992 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SLC26A4O43511 780 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 BGNP21810 368 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TARSP26639 723 aaKnown RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SNRPFP62306 86 aaKnown RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 DPYSL3Q14195 570 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF235Q14590 738 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 BOLA3Q53S33 107 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ANKRD20A8PQ5CZ79 823 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 EFHC1Q5JVL4 640 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 NAPRTQ6XQN6 538 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CARNMT1Q8N4J0 409 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 RNF148Q8N7C7 305 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF366Q8N895 744 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PCDH19Q8TAB3 1148 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 MYLIPQ8WY64 445 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CDKL2Q92772 493 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 STRA6Q9BX79 667 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TMBIM4Q9HC24 238 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PCDH18Q9HCL0 1135 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 KCND1Q9NSA2 647 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 IARS2Q9NSE4 1012 aaKnown RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SLC38A7Q9NVC3 462 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 MOSPD1Q9UJG1 213 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 A0A1W2PQH9 124 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CDH16O75309 829 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SKAP2O75563 359 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 VAPBO95292 243 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CYP1A1P04798 512 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TGM2P21980 687 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CDC25CP30307 473 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CDKN2BP42772 138 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF143P52747 638 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TAF10Q12962 218 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CTBP1Q13363 440 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CBX2Q14781 532 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 DLG2Q15700 870 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 AGMOQ6ZNB7 445 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TAS2R42Q7RTR8 314 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 KCTD17Q8N5Z5 321 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TTC13Q8NBP0 860 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SPATA17Q96L03 361 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF358Q9NW07 568 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 GTSE1Q9NYZ3 720 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TLK1Q9UKI8 766 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 NCANO14594 1321 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 COL2A1P02458 1487 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 RARGP13631 454 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF460Q14592 562 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PTPRCAPQ14761 206 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PPM1JQ5JR12 505 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 LAYNQ6UX15 382 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PDZD4Q76G19 769 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SDCCAG8Q86SQ7 713 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 LRRC6Q86X45 466 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PHF13Q86YI8 300 aaPredicted RBP8.35□□□□□ -1.07
CKAP2-203ENST00000378037 DENND1CQ8IV53 801 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 NUDCD3Q8IVD9 361 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 ANKRD52Q8NB46 1076 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 TCP10LQ8TDR4 215 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 FICDQ9BVA6 458 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 NRDE2Q9H7Z3 1164 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 GRHL1Q9NZI5 618 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 GMIPQ9P107 970 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SLC17A7Q9P2U7 560 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 CACNA1EQ15878 2313 aa8.35□□□□□ -1.07
CKAP2-203ENST00000378037 SEC16AO15027 2179 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 PTGESO14684 152 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 CAPN15O75808 1086 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 METTL18O95568 372 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ALDH3A1P30838 453 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 OR1E1P30953 314 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 FNTAP49354 379 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SLC5A3P53794 718 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 HDAC4P56524 1084 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ZDHHC24Q6UX98 284 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ARHGAP36Q6ZRI8 547 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 EXOC3L1Q86VI1 746 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 IQCKQ8N0W5 287 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 BBOF1Q8ND07 529 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 CFAP61Q8NHU2 1237 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 DPF3Q92784 378 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ATP2A3Q93084 1043 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 HDAC11Q96DB2 347 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 PHF21BQ96EK2 531 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 MFSD3Q96ES6 412 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 IFT43Q96FT9 208 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SEC16BQ96JE7 1060 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 MARK4Q96L34 752 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms