RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TMA16Q96EY4 203 aaKnown RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 PNKPQ96T60 521 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 SLC2A11Q9BYW1 496 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 ADAM33Q9BZ11 813 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 FOXQ1Q9C009 403 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 CALCOCO1Q9P1Z2 691 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 MIA3Q5JRA6 1907 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 CYP1A2P05177 515 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 NUBP1P53384 320 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 GALCP54803 685 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 ATP11AP98196 1134 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 FBXO43Q4G163 708 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 NUDT18Q6ZVK8 323 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 TMTC1Q8IUR5 882 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 CCDC105Q8IYK2 499 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 ZNF557Q8N988 423 aaPredicted RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 IER2Q9BTL4 223 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 THAP2Q9H0W7 228 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 DEC1Q9P2X7 70 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 FBXO10Q9UK96 956 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 NDRG2Q9UN36 371 aaKnown RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 TYW5A2RUC4 315 aaKnown RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 H2AFZP0C0S5 128 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 CHRNB1P11230 501 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 SLC6A4P31645 630 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 ARL13BQ3SXY8 428 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 MS4A13Q5J8X5 152 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 H2AFVQ71UI9 128 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 DNAAF5Q86Y56 855 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 C1orf74Q96LT6 269 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 HAPLN3Q96S86 360 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 PRMT1Q99873 361 aaKnown RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 TKTL2Q9H0I9 626 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 MYO1AQ9UBC5 1043 aa13.72□□□□□ -0.21
CKAP2-202ENST00000378034 MTF2Q9Y483 593 aaPredicted RBP13.72□□□□□ -0.21
CKAP2-202ENST00000378034 F5P12259 2224 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 GOLGA6L7A0A1B0GV03 622 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 F5H5T6 163 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 TULP3O75386 442 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 APODP05090 189 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 TACR2P21452 398 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 CYLC1P35663 651 aaPredicted RBP13.71□□□□□ -0.21
CKAP2-202ENST00000378034 GRIA2P42262 883 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 SLC6A11P48066 632 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 FZD5Q13467 585 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 CCINQ13939 588 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 ACAP1Q15027 740 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 CDO1Q16878 200 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 TTC39BQ5VTQ0 682 aaPredicted RBP13.71□□□□□ -0.21
CKAP2-202ENST00000378034 RNF43Q68DV7 783 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 FSTL4Q6MZW2 842 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 CHSY1Q86X52 802 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 CTNNBL1Q8WYA6 563 aaPredicted RBP13.71□□□□□ -0.21
CKAP2-202ENST00000378034 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 DNAJC17Q9NVM6 304 aaKnown RBP13.71□□□□□ -0.21
CKAP2-202ENST00000378034 LCMT1Q9UIC8 334 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 INTUQ9ULD6 942 aa13.71□□□□□ -0.21
CKAP2-202ENST00000378034 CCP110O43303 1012 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 TSPAN3O60637 253 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 PAGE1O75459 146 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 LCA5LO95447 670 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 TMEM253P0C7T8 217 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 AVPR2P30518 371 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 TNFRSF4P43489 277 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 AIF1P55008 147 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 HDAC4P56524 1084 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 GSDMDP57764 484 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 RAP1GAP2Q684P5 730 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 GRAMD4Q6IC98 578 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 RFWD3Q6PCD5 774 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 C12orf40Q86WS4 652 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 NAT16Q8N8M0 369 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 SPC24Q8NBT2 197 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 NTAN1Q96AB6 310 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 FBRSL1Q9HCM7 1045 aaKnown RBP13.71□□□□□ -0.22
CKAP2-202ENST00000378034 ARHGEF4Q9NR80 690 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 SPTLC3Q9NUV7 552 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 DLGAP2Q9P1A6 1054 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 UVRAGQ9P2Y5 699 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.22
CKAP2-202ENST00000378034 SLC27A6Q9Y2P4 619 aa13.71□□□□□ -0.22
CKAP2-202ENST00000378034 PI15O43692 258 aa13.7□□□□□ -0.22
CKAP2-202ENST00000378034 KAT7O95251 611 aa13.7□□□□□ -0.22
CKAP2-202ENST00000378034 CISD3P0C7P0 127 aa13.7□□□□□ -0.22
CKAP2-202ENST00000378034 PSMA2P25787 234 aa13.7□□□□□ -0.22
CKAP2-202ENST00000378034 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms