RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 SLIT2O94813 1529 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 ALDH1A2O94788 518 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 TUSC3Q13454 348 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SPDYCQ5MJ68 293 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SEMA4AQ9H3S1 761 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 KLC4Q9NSK0 619 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.17■□□□□ 0.82
PCDH8-202ENST00000377942 ARHGAP26Q9UNA1 814 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 GOLGA8TH3BQL2 631 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 RIPK2O43353 540 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 ZNF7P17097 686 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 PRKAA2P54646 552 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 POLR2LP62875 67 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 EIF2B5Q13144 721 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 FAM183BPQ6ZVS7 135 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 PATL1Q86TB9 770 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 TUBGCP3Q96CW5 907 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 POLR1EQ9GZS1 481 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 TRIM16O95361 564 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 HSPA1AP0DMV8 641 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 HSPA1BP0DMV9 641 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 PECAM1P16284 738 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 RPL21P46778 160 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 NOMO3P69849 1222 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 SLC45A4Q5BKX6 768 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 SCARA3Q6AZY7 606 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 TSHZ1Q6ZSZ6 1077 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 POLNQ7Z5Q5 900 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 LRRC34Q8IZ02 419 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 LNX1Q8TBB1 728 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 PRR23AA6NEV1 266 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 WNT7AO00755 349 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 ONECUT3O60422 494 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 CYP2A6P11509 494 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 MMP13P45452 471 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 RAP1GDS1P52306 607 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 RFWD2Q8NHY2 731 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 THTPAQ9BU02 230 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 C2orf49Q9BVC5 232 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 SPASTQ9UBP0 616 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 WARS2Q9UGM6 360 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 TEKT2Q9UIF3 430 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 KCNK1O00180 336 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 ATP5BP06576 529 aaKnown RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 WEE1P30291 646 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 PTAR1Q7Z6K3 402 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 CLEC4DQ8WXI8 215 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 TBL1YQ9BQ87 522 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 BTBD7Q9P203 1132 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 RAB21Q9UL25 225 aa20.16■□□□□ 0.82
PCDH8-202ENST00000377942 MAFBQ9Y5Q3 323 aaPredicted RBP20.16■□□□□ 0.82
PCDH8-202ENST00000377942 TRDMT1O14717 391 aaKnown RBP20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CREG2Q8IUH2 290 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 DYRK1BQ9Y463 629 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 PCDHA2Q9Y5H9 948 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 UNCXA6NJT0 531 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 ACADMP11310 421 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CRABP2P29373 138 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CLK2P49760 499 aaKnown RBP20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CCL23P55773 120 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 BCL2L1Q07817 233 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.15■□□□□ 0.82
PCDH8-202ENST00000377942 KCNMB4Q86W47 210 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 FAM124BQ9H5Z6 455 aaPredicted RBP20.15■□□□□ 0.82
PCDH8-202ENST00000377942 ANKZF1Q9H8Y5 726 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CNGB3Q9NQW8 809 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 GRK4P32298 578 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 COPAP53621 1224 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 IFNEQ86WN2 208 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 MYLPFQ96A32 169 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CPNE1Q99829 537 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 CTNNAL1Q9UBT7 734 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 SPACA6W5XKT8 324 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 GJB6O95452 261 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 ADH1AP07327 375 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 PRMT2P55345 433 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 SKOR1P84550 965 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 DPYSL3Q14195 570 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 DHX33Q9H6R0 707 aaKnown RBP20.15■□□□□ 0.82
PCDH8-202ENST00000377942 TAS2R14Q9NYV8 317 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 MSRAQ9UJ68 235 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 NAALADL1Q9UQQ1 740 aa20.15■□□□□ 0.82
PCDH8-202ENST00000377942 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.82
PCDH8-202ENST00000377942 ARHGAP28Q9P2N2 729 aa20.14■□□□□ 0.82
PCDH8-202ENST00000377942 IGLV3-22A0A075B6J6 115 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 TRAV19A0A0A6YYK7 116 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 FAM95CA0A1B0GW59 222 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 THRAP10827 490 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 RBL1P28749 1068 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 MAPK8P45983 427 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 TMCO4Q5TGY1 634 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 SEL1L3Q68CR1 1132 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 YIPF2Q9BWQ6 316 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 FZD9O00144 591 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 CHKAP35790 457 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 SLAIN1Q8ND83 568 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 LPPQ93052 612 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 MAML3Q96JK9 1138 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 CEP19Q96LK0 163 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms