RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 RRM1P23921 792 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CDC25CP30307 473 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 BLVRAP53004 296 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 OVGP1Q12889 678 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 FAM46CQ5VWP2 391 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 DDHD1Q8NEL9 900 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CMTM5Q96DZ9 223 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 PRPF18Q99633 342 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 GPATCH2LQ9NWQ4 482 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CST8O60676 142 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CCR1P32246 355 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 MAGEA4P43358 317 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 FGFBP2Q9BYJ0 223 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 OSBPL8Q9BZF1 889 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 UVRAGQ9P2Y5 699 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 DTNAQ9Y4J8 743 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 PDE2AO00408 941 aaPredicted RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 EPHB6O15197 1021 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CLTBP09497 229 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 MAP3K10Q02779 954 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 GPM6BQ13491 265 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 APLFQ8IW19 511 aaPredicted RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 JADE3Q92613 823 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 ERP44Q9BS26 406 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 KCNMB3Q9NPA1 279 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 UBA1P22314 1058 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 PAX7P23759 505 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 UGCGQ16739 394 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 DEPDC1Q5TB30 811 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 C16orf59Q7L2K0 433 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 IFNEQ86WN2 208 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 LGI2Q8N0V4 545 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 WWOXQ9NZC7 414 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 TRMT6Q9UJA5 497 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 P4HA2O15460 535 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 RASSF9O75901 435 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 ASGR1P07306 291 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 POLR2LP62875 67 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 CRHR2Q13324 411 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 TRAPPC11Q7Z392 1133 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 B4GALNT2Q8NHY0 566 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 EPS8L3Q8TE67 593 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 NMD3Q96D46 503 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 ZC3H7BQ9UGR2 993 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 PHTF1Q9UMS5 762 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 KLRC4O43908 158 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 PSMD10O75832 226 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SCNN1BP51168 640 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 RTP1P59025 263 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 BST2Q10589 180 aaKnown RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 LINC00523Q86TU6 105 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ATP5C1P36542 298 aaKnown RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CHI3L2Q15782 390 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SLC35C1Q96A29 364 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ARHGEF26Q96DR7 871 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SHCBP1LQ9BZQ2 653 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 INTS13Q9NVM9 706 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 TNFSF13BQ9Y275 285 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 TCHHQ07283 1943 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 DLGAP3O95886 979 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SPATA31D3P0C874 917 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 GNSP15586 552 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CHKAP35790 457 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 C16orf72Q14CZ0 275 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SETMARQ53H47 684 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SPATA31D4Q6ZUB0 917 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 WDR49Q8IV35 697 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CLYBLQ8N0X4 340 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF614Q8N883 585 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CLPBQ9H078 707 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 SAE1Q9UBE0 346 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 BLOC1S6Q9UL45 172 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CDYLQ9Y232 598 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 MYO1GB0I1T2 1018 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 RPN2P04844 631 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 DEFA1P59665 94 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 DEFA3P59666 94 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ACAD10Q6JQN1 1059 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 TATDN1Q6P1N9 297 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 TTC33Q6PID6 262 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 C3orf62Q6ZUJ4 267 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CCDC103Q8IW40 242 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 TMEM86AQ8N2M4 240 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms