RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 ITPKAP23677 461 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 CMA1P23946 247 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 SCNN1AP37088 669 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 PIK3CAP42336 1068 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 GCLMP48507 274 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 NOVA1P51513 510 aaKnown RBP10.04□□□□□ -0.8
C9orf85-202ENST00000377027 VAMP7P51809 220 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 KIF11P52732 1056 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 NFIL3Q16649 462 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 ANO4Q32M45 955 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 HSF5Q4G112 596 aaPredicted RBP10.04□□□□□ -0.8
C9orf85-202ENST00000377027 C10orf76Q5T2E6 689 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 ATL3Q6DD88 541 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 BHLHA9Q7RTU4 235 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 UNC93AQ86WB7 457 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 SLC41A1Q8IVJ1 513 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 SVOPQ8N4V2 548 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 ZNF513Q8N8E2 541 aaPredicted RBP10.04□□□□□ -0.8
C9orf85-202ENST00000377027 PIGKQ92643 395 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 TAF4BQ92750 862 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 CALCOCO1Q9P1Z2 691 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 SEPT3Q9UH03 358 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 EVLQ9UI08 416 aaPredicted RBP10.04□□□□□ -0.8
C9orf85-202ENST00000377027 PILRBQ9UKJ0 227 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 RALYQ9UKM9 306 aaKnown RBP10.04□□□□□ -0.8
C9orf85-202ENST00000377027 SCML2Q9UQR0 700 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 SH3BP1Q9Y3L3 701 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 RAD54BQ9Y620 910 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 NYNRINQ9P2P1 1898 aaKnown RBP10.04□□□□□ -0.8
C9orf85-202ENST00000377027 ATP8B3O60423 1300 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 IGHV1OR15-9A0A0B4J2B8 117 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TBC1D3BA6NDS4 549 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.03□□□□□ -0.8
C9orf85-202ENST00000377027 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 WASH3PC4AMC7 463 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 NEDD8-MDP1E9PL57 170 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TULP2O00295 520 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 MAPK13O15264 365 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 STC2O76061 302 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 FAM200BP0CF97 657 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 ARAFP10398 606 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 HOXB2P14652 356 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TYRP14679 529 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 CD58P19256 250 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 ACO1P21399 889 aaKnown RBP10.03□□□□□ -0.8
C9orf85-202ENST00000377027 NR2F2P24468 414 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 ZNF252P-AS1Q0IIN9 211 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TRIM61Q5EBN2 209 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 EOGTQ5NDL2 527 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TPGS1Q6ZTW0 290 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 C11orf74Q86VG3 221 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 HSCBQ8IWL3 235 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 SMYD4Q8IYR2 804 aaPredicted RBP10.03□□□□□ -0.8
C9orf85-202ENST00000377027 DEFB119Q8N690 84 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 RBBP8NLQ8NC74 664 aaPredicted RBP10.03□□□□□ -0.8
C9orf85-202ENST00000377027 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 CCDC26Q8TAB7 109 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TMEM131Q92545 1883 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 CYFIP2Q96F07 1278 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 EEF2KMTQ96G04 330 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 GABRG3Q99928 467 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 TMEM9BQ9NQ34 198 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
C9orf85-202ENST00000377027 PLK2Q9NYY3 685 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 DEC1Q9P2X7 70 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 FBXO10Q9UK96 956 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 CFAP45Q9UL16 551 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 CLEC4EQ9ULY5 219 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 NUMA1Q14980 2115 aa10.03□□□□□ -0.8
C9orf85-202ENST00000377027 PLXNB3Q9ULL4 1909 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 RARGP13631 454 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 ENGP17813 658 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 NTSR1P30989 418 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 IDH3AP50213 366 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 FAM193AP78312 1265 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 ZNF394Q53GI3 561 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 FYB2Q5VWT5 728 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 GRAMD4Q6IC98 578 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 KLHDC10Q6PID8 442 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 SLC23A3Q6PIS1 610 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 KRBA2Q6ZNG9 492 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 CCDC186Q7Z3E2 898 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 SYT12Q8IV01 421 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 GUF1Q8N442 669 aaKnown RBP10.02□□□□□ -0.81
C9orf85-202ENST00000377027 SLC4A11Q8NBS3 891 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 DEFB124Q8NES8 71 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 IPO4Q8TEX9 1081 aaKnown RBP10.02□□□□□ -0.81
C9orf85-202ENST00000377027 BHMTQ93088 406 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 SLC30A3Q99726 388 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 BBS2Q9BXC9 721 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 NT5C1AQ9BXI3 368 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 NIF3L1Q9GZT8 377 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 FBXO44Q9H4M3 255 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 MMRN2Q9H8L6 949 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 CAPN10Q9HC96 672 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 PNPLA8Q9NP80 782 aa10.02□□□□□ -0.81
C9orf85-202ENST00000377027 TLR8Q9NR97 1041 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms