RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SIGLEC10Q96LC7 697 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 SLC9A7Q96T83 725 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 SF3B1O75533 1304 aaKnown RBP eCLIP20.85■□□□□ 0.93
VSX1-202ENST00000376709 CXorf49A8MYA2 514 aaPredicted RBP20.85■□□□□ 0.93
VSX1-202ENST00000376709 KIF3CO14782 793 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 B3GAT3O94766 335 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 C1QAP02745 245 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 ADRA1BP35368 520 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 AIF1P55008 147 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 PRKD1Q15139 912 aaPredicted RBP20.85■□□□□ 0.93
VSX1-202ENST00000376709 LGSNQ5TDP6 509 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 MRPL10Q7Z7H8 261 aaKnown RBP20.85■□□□□ 0.93
VSX1-202ENST00000376709 RPAINQ86UA6 219 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 MPP5Q8N3R9 675 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 FITM2Q8N6M3 262 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 CEP41Q9BYV8 373 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 PLAC1Q9HBJ0 212 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 DDIT4Q9NX09 232 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 ZNF180Q9UJW8 692 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 TRIM49D1C9J1S8 452 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 MGEA5O60502 916 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 OPHN1O60890 802 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 LTFP02788 710 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 GLUD2P49448 558 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 RAB27AP51159 221 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 NOGQ13253 232 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 DPYSQ14117 519 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 RAB41Q5JT25 222 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 CTU1Q7Z7A3 348 aaKnown RBP20.85■□□□□ 0.93
VSX1-202ENST00000376709 ECHDC2Q86YB7 292 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 TRIM56Q9BRZ2 755 aaKnown RBP20.85■□□□□ 0.93
VSX1-202ENST00000376709 RHOBTB2Q9BYZ6 727 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 KLC4Q9NSK0 619 aa20.85■□□□□ 0.93
VSX1-202ENST00000376709 CASP8AP2Q9UKL3 1982 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 SNRPAP09012 282 aaKnown RBP20.84■□□□□ 0.93
VSX1-202ENST00000376709 CDK16Q00536 496 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 MGAT5Q09328 741 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 PAFAH1B3Q15102 231 aaKnown RBP20.84■□□□□ 0.93
VSX1-202ENST00000376709 CASC4Q6P4E1 433 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 METTL23Q86XA0 190 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 MYLPFQ96A32 169 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 NTAN1Q96AB6 310 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 IQCGQ9H095 443 aaKnown RBP20.84■□□□□ 0.93
VSX1-202ENST00000376709 VPS11Q9H270 941 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 PRDM12Q9H4Q4 367 aa20.84■□□□□ 0.93
VSX1-202ENST00000376709 TDRD15B5MCY1 1934 aaKnown RBP20.84■□□□□ 0.93
VSX1-202ENST00000376709 C9IYK1 514 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 FAM72CH0Y354 149 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 ALADP13716 330 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 TPI1P60174 286 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 SLC18A2Q05940 514 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 ARL13BQ3SXY8 428 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 GALNTL6Q49A17 601 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 FAM72AQ5TYM5 149 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 FAM72DQ6L9T8 149 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 CYB5D1Q6P9G0 228 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 FAM72BQ86X60 149 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 PDCD7Q8N8D1 485 aaKnown RBP20.83■□□□□ 0.93
VSX1-202ENST00000376709 HASPINQ8TF76 798 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 WDR6Q9NNW5 1121 aaKnown RBP20.83■□□□□ 0.93
VSX1-202ENST00000376709 TRMT13Q9NUP7 481 aaKnown RBP20.83■□□□□ 0.93
VSX1-202ENST00000376709 INPP5FQ9Y2H2 1132 aa20.83■□□□□ 0.93
VSX1-202ENST00000376709 ZNF623O75123 536 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 TRMT10BQ6PF06 316 aaKnown RBP20.83■□□□□ 0.92
VSX1-202ENST00000376709 PDZD4Q76G19 769 aaPredicted RBP20.83■□□□□ 0.92
VSX1-202ENST00000376709 EDEM1Q92611 657 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 FAM111AQ96PZ2 611 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 ECT2Q9H8V3 914 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 SMYD2Q9NRG4 433 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 FBXW11Q9UKB1 542 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 PCDHA11Q9Y5I1 949 aa20.83■□□□□ 0.92
VSX1-202ENST00000376709 COPEO14579 308 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 DCLK1O15075 740 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 KRT38O76015 456 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 NEK3P51956 506 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 SCAPQ12770 1279 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 FYB2Q5VWT5 728 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 OTOAQ7RTW8 1153 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 SUGP1Q8IWZ8 645 aaKnown RBP20.82■□□□□ 0.92
VSX1-202ENST00000376709 STAMBPL1Q96FJ0 436 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 ANLNQ9NQW6 1124 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 NOD1Q9Y239 953 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 USH1CQ9Y6N9 552 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 A0A0U1RQF3 1178 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 HHLA1C9JL84 531 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 MLNP12872 115 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 ERCC2P18074 760 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 BDNFP23560 247 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 CST5P28325 142 aaPredicted RBP20.82■□□□□ 0.92
VSX1-202ENST00000376709 BRCC3P46736 316 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 BNIP1Q12981 228 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 LPIN1Q14693 890 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 SETDB1Q15047 1291 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 BSPRYQ5W0U4 402 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 SH2D5Q6ZV89 423 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 DEPDC1BQ8WUY9 529 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 PGAP3Q96FM1 320 aaPredicted RBP20.82■□□□□ 0.92
VSX1-202ENST00000376709 ADAM2Q99965 735 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 RTP3Q9BQQ7 232 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 ACBD6Q9BR61 282 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms