RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ZNF333Q96JL9 665 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 SENP8Q96LD8 212 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 MTG1Q9BT17 334 aaPredicted RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 ZFYVE28Q9HCC9 887 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 NMRK2Q9NPI5 230 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 TMPRSS4Q9NRS4 437 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 TXLNGQ9NUQ3 528 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 FAM105AQ9NUU6 356 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 DDX43Q9NXZ2 648 aaKnown RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 GTF2IRD1Q9UHL9 959 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 NUMBLQ9Y6R0 609 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 SYNJ2BP-COX16A0A087WUM0 186 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 GOLGA8RI6L899 631 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 GCATO75600 419 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 PGK1P00558 417 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 CTSHP09668 335 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 CBLBQ13191 982 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 RCN2Q14257 317 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 KBTBD12Q3ZCT8 623 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 RGMBQ6NW40 437 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 CLEC20AQ6ZU45 233 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 ARHGAP22Q7Z5H3 698 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 TRPM7Q96QT4 1865 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 KLF6Q99612 283 aaPredicted RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 LRRC4Q9HBW1 653 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 CRTAC1Q9NQ79 661 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 DTLQ9NZJ0 730 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 COX16Q9P0S2 106 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 TIMM13Q9Y5L4 95 aaPredicted RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 NR2E3Q9Y5X4 410 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 USP3Q9Y6I4 520 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 DAB1O75553 588 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 CHRNA1P02708 482 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 FAM163BP0C2L3 166 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 PYGBP11216 843 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 MAGEA6P43360 314 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 HHATQ5VTY9 493 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 OTUD1Q5VV17 481 aaPredicted RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 SYPL2Q5VXT5 272 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 LVRNQ6Q4G3 990 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 PRPF39Q86UA1 669 aaKnown RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 KCTD13Q8WZ19 329 aa14.42□□□□□ -0.1
MSH5-202ENST00000375740 DDX50Q9BQ39 737 aaKnown RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 FRMD8Q9BZ67 464 aaPredicted RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 SSU72Q9NP77 194 aaKnown RBP14.42□□□□□ -0.1
MSH5-202ENST00000375740 KPNA6O60684 536 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 NOS2P35228 1153 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 ARL4AP40617 200 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 CLCNKBP51801 687 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 GJA9P57773 515 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 CRHR2Q13324 411 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 PDK4Q16654 411 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 DSTYKQ6XUX3 929 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 NPY6RQ99463 290 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 SLC38A7Q9NVC3 462 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 E7ENQ6 273 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 M0QYT0 321 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 NVLO15381 856 aaKnown RBP14.41□□□□□ -0.1
MSH5-202ENST00000375740 THP07101 528 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 TKTL1P51854 596 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 CCDC15Q0P6D6 951 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 CUL3Q13618 768 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 HFE2Q6ZVN8 426 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 VPS52Q8N1B4 723 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 SIX6OS1Q8N1H7 587 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 NETO2Q8NC67 525 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 SLC44A1Q8WWI5 657 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 NT5C3BQ969T7 300 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 QKIQ96PU8 341 aaKnown RBP eCLIP14.41□□□□□ -0.1
MSH5-202ENST00000375740 LRRC37BQ96QE4 947 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 PNPLA8Q9NP80 782 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 ZC3H7BQ9UGR2 993 aaKnown RBP14.41□□□□□ -0.1
MSH5-202ENST00000375740 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
MSH5-202ENST00000375740 SPAG6O75602 509 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 DGKIO75912 1065 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 ZWINTO95229 277 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 MT-ND3P03897 115 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 FAAP100Q0VG06 881 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 NME3Q13232 169 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 PTK7Q13308 1070 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 TSNAXIP1Q2TAA8 658 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 SAPCD2Q86UD0 394 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 MCUQ8NE86 351 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 TCP10LQ8TDR4 215 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 GRAMD1AQ96CP6 724 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 C12orf65Q9H3J6 166 aaKnown RBP14.4□□□□□ -0.1
MSH5-202ENST00000375740 POPDC2Q9HBU9 364 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 KRT82Q9NSB4 513 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.4□□□□□ -0.1
MSH5-202ENST00000375740 PHTF1Q9UMS5 762 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 IKBKGQ9Y6K9 419 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 IQANK1A0A1B0GTG1 560 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 MYBPHLA2RUH7 354 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 NRP1O14786 923 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 TOMM70O94826 608 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 FAM200BP0CF97 657 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms