RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 A0A0U1RQJ8 604 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 FRMD3A2A2Y4 597 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 CCDC151A5D8V7 595 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 DDTLA6NHG4 134 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 B4DLN1 442 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 EIF3CLB5ME19 914 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 K7ESF4 209 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 PSMD14O00487 310 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 MPHOSPH10O00566 681 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 TBX3O15119 743 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ZNF185O15231 689 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ECE2O60344 883 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 PPFIA2O75334 1257 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ENDOD1O94919 500 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 LMNAP02545 664 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 TUBBP07437 444 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 EEF2P13639 858 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 TRIM21P19474 475 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 CYLC1P35663 651 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 GPR3P46089 330 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 EPHB1P54762 984 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 KRT83P78385 493 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 BLOC1S1P78537 153 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 MXRA7P84157 204 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ICA1Q05084 483 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 PPP3CAQ08209 521 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 DMTNQ08495 405 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 BRD3Q15059 726 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 CDC37Q16543 378 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 UBE2SQ16763 222 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 QRICH1Q2TAL8 776 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 CERKLQ49MI3 558 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 Q4G0T1 1027 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ZCWPW2Q504Y3 356 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 TOR2AQ5JU69 321 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 AGAP9Q5VTM2 703 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 RNF219Q5W0B1 726 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 HAUS3Q68CZ6 603 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 WDR59Q6PJI9 974 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 TMCO3Q6UWJ1 677 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 C2CD5Q86YS7 1000 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 RHOT2Q8IXI1 618 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ZC3H3Q8IXZ2 948 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 MSANTD4Q8NCY6 345 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 CPEB3Q8NE35 698 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 SUPT20HQ8NEM7 779 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 REPS2Q8NFH8 660 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ATRIPQ8WXE1 791 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 DNAJC19Q96DA6 116 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 COQ10AQ96MF6 247 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 UHRF1Q96T88 793 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 EIF3CQ99613 913 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 CHP1Q99653 195 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 TSG101Q99816 390 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 SLF1Q9BQI6 1058 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 PSTPIP2Q9H939 334 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 LZTFL1Q9NQ48 299 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 LANCL2Q9NS86 450 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 ZNHIT6Q9NWK9 470 aaKnown RBP5.2□□□□□ -1.58
USP48-202ENST00000374730 MOCS1Q9NZB8 636 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 FAM30AQ9NZY2 134 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 SIK3Q9Y2K2 1263 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 ANO9A1A5B4 782 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 DRGXA6NNA5 263 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 H0YIN7 160 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 PES1O00541 588 aaKnown RBP5.19□□□□□ -1.58
USP48-202ENST00000374730 MEIS2O14770 477 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 PRKD3O94806 890 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 KIF20AO95235 890 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 IPO7O95373 1038 aaKnown RBP5.19□□□□□ -1.58
USP48-202ENST00000374730 LCA5LO95447 670 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 GNA14O95837 355 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 FOSP01100 380 aaPredicted RBP5.19□□□□□ -1.58
USP48-202ENST00000374730 PNMA6AP0CW24 399 aaPredicted RBP5.19□□□□□ -1.58
USP48-202ENST00000374730 TGM1P22735 817 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 DDX6P26196 483 aaKnown RBP eCLIP5.19□□□□□ -1.58
USP48-202ENST00000374730 CIITAP33076 1130 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 SLC16A2P36021 539 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 SLC1A4P43007 532 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 AVPR1BP47901 424 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 MTNR1BP49286 362 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 VAV2P52735 878 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 CHN2P52757 468 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 USP14P54578 494 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 SRSF2Q01130 221 aaKnown RBP5.19□□□□□ -1.58
USP48-202ENST00000374730 MGAT2Q10469 447 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 COASYQ13057 564 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 TRAF1Q13077 416 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 ABCB5Q2M3G0 1257 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 TEX35Q5T0J7 233 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 SYDE2Q5VT97 1194 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 LHFPL2Q6ZUX7 228 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 TRAPPC11Q7Z392 1133 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 ZNF575Q86XF7 245 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 CCDC65Q8IXS2 484 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 MYOCDQ8IZQ8 938 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 PQLC1Q8N2U9 271 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 BEND2Q8NDZ0 799 aa5.19□□□□□ -1.58
USP48-202ENST00000374730 ETNPPLQ8TBG4 499 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms