RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 OR4Q2P0C623 313 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 PYGBP11216 843 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 HOXC8P31273 242 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 NUMBP49757 651 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 SREBF2Q12772 1141 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 NR1H3Q13133 447 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 RIPK1Q13546 671 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 CES3Q6UWW8 571 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 TDRPQ86YL5 185 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 TTC17Q96AE7 1141 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 SERAC1Q96JX3 654 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 SLC13A1Q9BZW2 595 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 SIK2Q9H0K1 926 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 PRDM12Q9H4Q4 367 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 TTLL3Q9Y4R7 772 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 NUP205Q92621 2012 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 ZNF638Q14966 1978 aaKnown RBP18.86■□□□□ 0.61
RXRB-202ENST00000374685 SEPT4O43236 478 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 DAB1O75553 588 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 PEX19P40855 299 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 SCAMP5Q8TAC9 235 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 KDM4CQ9H3R0 1056 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 CORO1CQ9ULV4 474 aaPredicted RBP18.86■□□□□ 0.61
RXRB-202ENST00000374685 CFAP69A5D8W1 941 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 I6L893 689 aaPredicted RBP18.85■□□□□ 0.61
RXRB-202ENST00000374685 RNF103O00237 685 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 CA12O43570 354 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 ANKRD20A2Q5SQ80 823 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 ANKRD20A1Q5TYW2 823 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 ANKRD20A3Q5VUR7 823 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 ADGRD1Q6QNK2 874 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 COLGALT1Q8NBJ5 622 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 SPDYE1Q8NFV5 336 aaPredicted RBP18.85■□□□□ 0.61
RXRB-202ENST00000374685 STAMBPL1Q96FJ0 436 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 P2RY11Q96G91 374 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 TMLHEQ9NVH6 421 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 ACTL7BQ9Y614 415 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 TRIM49D1C9J1S8 452 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 AOC2O75106 756 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 SRGAP2BP0DMP2 458 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 SLC5A9Q2M3M2 681 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 FAM111AQ96PZ2 611 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 NPY6RQ99463 290 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 PHTF1Q9UMS5 762 aa18.85■□□□□ 0.61
RXRB-202ENST00000374685 LIN7AO14910 233 aaPredicted RBP18.84■□□□□ 0.61
RXRB-202ENST00000374685 LPXNO60711 386 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 ZFXP17010 805 aaPredicted RBP18.84■□□□□ 0.61
RXRB-202ENST00000374685 PSMB4P28070 264 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 LHX1P48742 406 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 DAOAP59103 153 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 IRX4P78413 519 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 UPP1Q16831 310 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 MROH9Q5TGP6 573 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 UNC5AQ6ZN44 842 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 CELF6Q96J87 481 aaKnown RBP18.84■□□□□ 0.61
RXRB-202ENST00000374685 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.612e-8■■□□□ 11.7
RXRB-202ENST00000374685 SMYD2Q9NRG4 433 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 SMG5Q9UPR3 1016 aaKnown RBP18.84■□□□□ 0.61
RXRB-202ENST00000374685 WDR27A2RRH5 827 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 H3BRJ5 948 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 TYROBPO43914 113 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 RAB27AP51159 221 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 SDHAF4Q5VUM1 108 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 PID1Q7Z2X4 250 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 LIMS2Q7Z4I7 341 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 RNF186Q9NXI6 227 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 DCTN4Q9UJW0 460 aa18.84■□□□□ 0.61
RXRB-202ENST00000374685 E2F8A0AVK6 867 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 CCDC78A2IDD5 438 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 LTFP02788 710 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 TPI1P60174 286 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 LPIN1Q14693 890 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 RFX8Q6ZV50 586 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 DENND1AQ8TEH3 1009 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 APOL2Q9BQE5 337 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 UBP1Q9NZI7 540 aa18.83■□□□□ 0.61
RXRB-202ENST00000374685 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 TOP3BO95985 862 aaKnown RBP18.83■□□□□ 0.6
RXRB-202ENST00000374685 ERCC2P18074 760 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 ITIH4Q14624 930 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 PDCD2Q16342 344 aaPredicted RBP18.83■□□□□ 0.6
RXRB-202ENST00000374685 TBC1D1Q86TI0 1168 aaPredicted RBP18.83■□□□□ 0.6
RXRB-202ENST00000374685 KIF2BQ8N4N8 673 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 PGBD4Q96DM1 585 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 KLHL14Q9P2G3 628 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 PRG3Q9Y2Y8 225 aaPredicted RBP18.83■□□□□ 0.6
RXRB-202ENST00000374685 USP3Q9Y6I4 520 aa18.83■□□□□ 0.6
RXRB-202ENST00000374685 PDCD11Q14690 1871 aaKnown RBP18.83■□□□□ 0.6
RXRB-202ENST00000374685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.82■□□□□ 0.6
RXRB-202ENST00000374685 IQANK1A0A1B0GTG1 560 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 PRPF4O43172 522 aaKnown RBP eCLIP18.82■□□□□ 0.62e-7■□□□□ 8.2
RXRB-202ENST00000374685 CSH1P0DML2 217 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 CSH2P0DML3 217 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 RWDD4Q6NW29 188 aaKnown RBP18.82■□□□□ 0.6
RXRB-202ENST00000374685 ZNF534Q76KX8 674 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 LRRTM3Q86VH5 581 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 LRRC6Q86X45 466 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 OR10T2Q8NGX3 314 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 TBC1D31Q96DN5 1066 aa18.82■□□□□ 0.6
RXRB-202ENST00000374685 TKTL2Q9H0I9 626 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms